Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D030025.5 |
| Conread position: | 12-434 |
| Cow position: | chr3:2654144-2653734 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 142 |
| Conread position: | 13-337 |
| Cow position: | chr3:472569-472251 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 13-380 |
| Cow position: | chr3:53410948-53410588 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 282, 90 |
| Conread position: | 13-398 |
| Cow position: | chr3:66638777-66638399 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 13-420 |
| Cow position: | chr3:77474797-77474390 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 148 |
| Conread position: | 13-443 |
| Cow position: | chr3:41211700-41212124 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 13-450 |
| Cow position: | chr3:6782421-6781990 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 14-450 |
| Cow position: | chr3:66890926-66891354 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 281, 133 |
| Conread position: | 22-480 |
| Cow position: | chr3:36795288-36795713 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 25-377 |
| Cow position: | chr3:57856761-57856407 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 25-445 |
| Cow position: | chr3:49613953-49614373 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-450 |
| Cow position: | chr3:2917485-2917062 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-450 |
| Cow position: | chr3:17828625-17829047 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-450 |
| Cow position: | chr3:37969103-37968684 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 167, 119 |
| Conread position: | 27-344 |
| Cow position: | chr3:10239671-10239356 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 27-345 |
| Cow position: | chr3:26666708-26667016 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 28-493 |
| Cow position: | chr3:57995604-57996053 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 254, 81 |
| Conread position: | 49-311 |
| Cow position: | chr3:84949147-84949405 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 104, 54 |
| Conread position: | 50-450 |
| Cow position: | chr3:4285885-4285488 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 102, 113 |
| Conread position: | 50-450 |
| Cow position: | chr3:64028086-64028483 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 245, 102 |
| Conread position: | 55-376 |
| Cow position: | chr3:37201801-37201492 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 80 |
| Conread position: | 55-478 |
| Cow position: | chr3:27552711-27552298 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 62-301 |
| Cow position: | chr3:12743047-12742822 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 67-329 |
| Cow position: | chr3:47184201-47184457 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 67-372 |
| Cow position: | chr3:15089262-15088953 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 76-377 |
| Cow position: | chr3:84863686-84863991 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 47 |
| Conread position: | 105-476 |
| Cow position: | chr3:22335837-22335476 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 190, 47 |
| Conread position: | 106-476 |
| Cow position: | chr3:72705141-72704776 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 189, 46 |
| Conread position: | 121-371 |
| Cow position: | chr3:9677753-9678004 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 86, 38 |
Show alignments to all cow chromosomes.