Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D030025.5 |
| Conread position: | 13-420 |
| Cow position: | chr4:66179146-66179544 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 13-440 |
| Cow position: | chr4:528835-528415 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 13-450 |
| Cow position: | chr4:602835-602401 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 13-450 |
| Cow position: | chr4:6268786-6269217 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 14-307 |
| Cow position: | chr4:33995752-33995456 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 71 |
| Conread position: | 14-439 |
| Cow position: | chr4:17926413-17926841 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 14-440 |
| Cow position: | chr4:3125620-3125202 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 281, 138 |
| Conread position: | 25-339 |
| Cow position: | chr4:65223705-65224018 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 25-476 |
| Cow position: | chr4:47764341-47764787 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 26-351 |
| Cow position: | chr4:12715810-12715490 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 80 |
| Conread position: | 66-380 |
| Cow position: | chr4:46537224-46536920 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 266, 25 |
| Conread position: | 67-463 |
| Cow position: | chr4:47247390-47247782 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 225, 35 |
| Conread position: | 68-391 |
| Cow position: | chr4:26630051-26630378 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 202, 87 |
| Conread position: | 124-380 |
| Cow position: | chr4:26718250-26717993 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 220 |
| Conread position: | 185-505 |
| Cow position: | chr4:42970901-42971221 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 107, 94 |
| Conread position: | 462-573 |
| Cow position: | chr4:64336069-64336180 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-581 |
| Cow position: | chr4:50494987-50494869 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.