Cow genome map


           Conread name:
           Ss1.1-LyN1-MLN01D030025.5
        

               Conread position:
               12-253
               

               Cow position:
               chr9:17541322-17541085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               13-440
               

               Cow position:
               chr9:34242588-34243011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 142
               

               Conread position:
               13-450
               

               Cow position:
               chr9:25483881-25483442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               25-339
               

               Cow position:
               chr9:9055071-9055384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               270, 127
               

               Conread position:
               25-440
               

               Cow position:
               chr9:16268366-16267947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               126, 184
               

               Conread position:
               25-450
               

               Cow position:
               chr9:31194172-31194597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               270, 133
               

               Conread position:
               25-476
               

               Cow position:
               chr9:1076203-1076648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 134
               

               Conread position:
               25-476
               

               Cow position:
               chr9:36724497-36724052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               183, 122
               

               Conread position:
               46-334
               

               Cow position:
               chr9:40259186-40258904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               145-473
               

               Cow position:
               chr9:22701974-22702301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 81
               
Show alignments to all cow chromosomes.