Cow genome map

Conread name: Ss1.1-LyN1-MLN01G030010.5

Conread position: 1-161
Cow position: chr1:82879520-82879679 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 49

Conread position: 1-164
Cow position: chr1:41607131-41607295 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 7

Conread position: 1-229
Cow position: chr1:80968971-80968745 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 158, 16

Conread position: 1-238
Cow position: chr1:31979256-31979023 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 11

Conread position: 1-238
Cow position: chr1:57357087-57357318 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 148, 11

Conread position: 1-245
Cow position: chr1:70106572-70106338 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 13, 76

Conread position: 1-252
Cow position: chr1:92708830-92709080 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 16

Conread position: 1-255
Cow position: chr1:66401825-66401580 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 105

Conread position: 1-267
Cow position: chr1:69239812-69240084 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 181

Conread position: 1-267
Cow position: chr1:89938913-89939188 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 1-274
Cow position: chr1:22607476-22607747 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 25

Conread position: 1-280
Cow position: chr1:33914488-33914216 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 11

Conread position: 1-281
Cow position: chr1:57562659-57562930 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 16

Conread position: 1-281
Cow position: chr1:71086721-71086996 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 120, 11

Conread position: 1-284
Cow position: chr1:6309615-6309338 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 11

Conread position: 1-312
Cow position: chr1:55114379-55114686 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 16

Conread position: 1-313
Cow position: chr1:23832340-23832655 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 1-319
Cow position: chr1:13992265-13992583 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 136, 11

Conread position: 1-320
Cow position: chr1:31342520-31342829 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 85

Conread position: 1-376
Cow position: chr1:85001065-85000675 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 256
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 16

Conread position: 1-396
Cow position: chr1:30087164-30087552 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 261
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 103

Conread position: 1-402
Cow position: chr1:70099500-70099083 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 17

Conread position: 1-412
Cow position: chr1:65187473-65187894 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 202, 11

Conread position: 2-234
Cow position: chr1:40377809-40378036 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 7

Conread position: 2-289
Cow position: chr1:1777929-1778211 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 103

Conread position: 2-376
Cow position: chr1:93391698-93392069 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 248
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 248, 10

Conread position: 2-382
Cow position: chr1:89915563-89915959 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 10

Conread position: 4-276
Cow position: chr1:93441187-93440922 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 163, 25

Conread position: 12-377
Cow position: chr1:8142700-8143072 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 38

Conread position: 12-382
Cow position: chr1:62197263-62197625 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 101

Conread position: 12-410
Cow position: chr1:72734336-72733940 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 85, 93

Conread position: 13-228
Cow position: chr1:26511982-26511765 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 92

Conread position: 17-284
Cow position: chr1:94761638-94761377 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 78

Conread position: 17-347
Cow position: chr1:86643330-86643010 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 72, 18

Conread position: 17-361
Cow position: chr1:15984017-15983669 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 142, 10

Conread position: 17-376
Cow position: chr1:81491172-81491541 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 71, 47

Conread position: 20-356
Cow position: chr1:43588358-43588699 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 74

Conread position: 29-269
Cow position: chr1:82419428-82419657 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 73

Conread position: 33-263
Cow position: chr1:93549684-93549916 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 12

Conread position: 33-406
Cow position: chr1:100389096-100389465 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 72

Conread position: 40-283
Cow position: chr1:13575210-13574976 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 117-313
Cow position: chr1:23713870-23714071 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 28, 5

Conread position: 122-412
Cow position: chr1:83321709-83321400 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 118

Conread position: 148-317
Cow position: chr1:82880860-82881024 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 117

Conread position: 148-320
Cow position: chr1:51533359-51533534 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 92

Conread position: 441-656
Cow position: chr1:39638335-39638109 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 129

Conread position: 442-623
Cow position: chr1:57563132-57563320 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 97, 0

Conread position: 442-666
Cow position: chr1:58314088-58314314 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 70

Conread position: 442-723
Cow position: chr1:70106227-70105956 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 100, 35

Conread position: 442-723
Cow position: chr1:93244985-93245275 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 92, 136

Conread position: 447-638
Cow position: chr1:89935694-89935888 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 14

Conread position: 452-754
Cow position: chr1:43378504-43378189 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 252

Conread position: 456-670
Cow position: chr1:28329518-28329300 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 126

Conread position: 859-1023
Cow position: chr1:64754267-64754434 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 873-1023
Cow position: chr1:57563982-57564133 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 128, 74

Show alignments to all cow chromosomes.