Cow genome map
Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
Conread position: | 1-161 |
Cow position: | chr1:82879520-82879679 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 60, 49 |
Conread position: | 1-164 |
Cow position: | chr1:41607131-41607295 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 86, 7 |
Conread position: | 1-229 |
Cow position: | chr1:80968971-80968745 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 159 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 158, 16 |
Conread position: | 1-238 |
Cow position: | chr1:31979256-31979023 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 164 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 87, 11 |
Conread position: | 1-238 |
Cow position: | chr1:57357087-57357318 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 171 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 148, 11 |
Conread position: | 1-245 |
Cow position: | chr1:70106572-70106338 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 180 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 13, 76 |
Conread position: | 1-252 |
Cow position: | chr1:92708830-92709080 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 171 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 87, 16 |
Conread position: | 1-255 |
Cow position: | chr1:66401825-66401580 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 184 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 12, 105 |
Conread position: | 1-267 |
Cow position: | chr1:69239812-69240084 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 198 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 13, 181 |
Conread position: | 1-267 |
Cow position: | chr1:89938913-89939188 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 189 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 1-274 |
Cow position: | chr1:22607476-22607747 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 187 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 1-280 |
Cow position: | chr1:33914488-33914216 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 187 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 125, 11 |
Conread position: | 1-281 |
Cow position: | chr1:57562659-57562930 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 190 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 87, 16 |
Conread position: | 1-281 |
Cow position: | chr1:71086721-71086996 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 194 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 120, 11 |
Conread position: | 1-284 |
Cow position: | chr1:6309615-6309338 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 191 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 86, 11 |
Conread position: | 1-312 |
Cow position: | chr1:55114379-55114686 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 211 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 78, 16 |
Conread position: | 1-313 |
Cow position: | chr1:23832340-23832655 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 1-319 |
Cow position: | chr1:13992265-13992583 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 206 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 136, 11 |
Conread position: | 1-320 |
Cow position: | chr1:31342520-31342829 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 229 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 29, 85 |
Conread position: | 1-376 |
Cow position: | chr1:85001065-85000675 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 256 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 82, 16 |
Conread position: | 1-396 |
Cow position: | chr1:30087164-30087552 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 261 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 15, 103 |
Conread position: | 1-402 |
Cow position: | chr1:70099500-70099083 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 17 |
Conread position: | 1-412 |
Cow position: | chr1:65187473-65187894 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 295 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 202, 11 |
Conread position: | 2-234 |
Cow position: | chr1:40377809-40378036 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 87, 7 |
Conread position: | 2-289 |
Cow position: | chr1:1777929-1778211 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 204 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 14, 103 |
Conread position: | 2-376 |
Cow position: | chr1:93391698-93392069 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 248 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 248, 10 |
Conread position: | 2-382 |
Cow position: | chr1:89915563-89915959 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 263 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 81, 10 |
Conread position: | 4-276 |
Cow position: | chr1:93441187-93440922 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 190 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 163, 25 |
Conread position: | 12-377 |
Cow position: | chr1:8142700-8143072 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 250 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 76, 38 |
Conread position: | 12-382 |
Cow position: | chr1:62197263-62197625 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 101 |
Conread position: | 12-410 |
Cow position: | chr1:72734336-72733940 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 287 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 85, 93 |
Conread position: | 13-228 |
Cow position: | chr1:26511982-26511765 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 160 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 77, 92 |
Conread position: | 17-284 |
Cow position: | chr1:94761638-94761377 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 183 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 70, 78 |
Conread position: | 17-347 |
Cow position: | chr1:86643330-86643010 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 223 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 72, 18 |
Conread position: | 17-361 |
Cow position: | chr1:15984017-15983669 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 231 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 142, 10 |
Conread position: | 17-376 |
Cow position: | chr1:81491172-81491541 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 247 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 71, 47 |
Conread position: | 20-356 |
Cow position: | chr1:43588358-43588699 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 229 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 61, 74 |
Conread position: | 29-269 |
Cow position: | chr1:82419428-82419657 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 168 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 8, 73 |
Conread position: | 33-263 |
Cow position: | chr1:93549684-93549916 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 173 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 19, 12 |
Conread position: | 33-406 |
Cow position: | chr1:100389096-100389465 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 248 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 47, 72 |
Conread position: | 40-283 |
Cow position: | chr1:13575210-13574976 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 173 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 117-313 |
Cow position: | chr1:23713870-23714071 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 151 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 28, 5 |
Conread position: | 122-412 |
Cow position: | chr1:83321709-83321400 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 212 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 128, 118 |
Conread position: | 148-317 |
Cow position: | chr1:82880860-82881024 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 38, 117 |
Conread position: | 148-320 |
Cow position: | chr1:51533359-51533534 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 38, 92 |
Conread position: | 441-656 |
Cow position: | chr1:39638335-39638109 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 160 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 90, 129 |
Conread position: | 442-623 |
Cow position: | chr1:57563132-57563320 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 132 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 442-666 |
Cow position: | chr1:58314088-58314314 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 158 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 105, 70 |
Conread position: | 442-723 |
Cow position: | chr1:70106227-70105956 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 197 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 100, 35 |
Conread position: | 442-723 |
Cow position: | chr1:93244985-93245275 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 210 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 92, 136 |
Conread position: | 447-638 |
Cow position: | chr1:89935694-89935888 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 22, 14 |
Conread position: | 452-754 |
Cow position: | chr1:43378504-43378189 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 217 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 80, 252 |
Conread position: | 456-670 |
Cow position: | chr1:28329518-28329300 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 152 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 86, 126 |
Conread position: | 859-1023 |
Cow position: | chr1:64754267-64754434 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 132 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 873-1023 |
Cow position: | chr1:57563982-57564133 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 128, 74 |
Show alignments to all cow chromosomes.