Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-207 |
| Cow position: | chr12:8493823-8494033 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 1-282 |
| Cow position: | chr12:30446670-30446395 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 16 |
| Conread position: | 1-319 |
| Cow position: | chr12:4146469-4146153 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 1-350 |
| Cow position: | chr12:32339081-32339432 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 1-351 |
| Cow position: | chr12:36251306-36251661 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 1-405 |
| Cow position: | chr12:40080602-40080200 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 111 |
| Conread position: | 1-444 |
| Cow position: | chr12:39937159-39937606 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 243, 11 |
| Conread position: | 3-367 |
| Cow position: | chr12:30531562-30531941 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 103, 9 |
| Conread position: | 3-444 |
| Cow position: | chr12:4540498-4540056 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 123 |
| Conread position: | 13-274 |
| Cow position: | chr12:7923339-7923591 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 173, 22 |
| Conread position: | 14-276 |
| Cow position: | chr12:1664581-1664839 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 71 |
| Conread position: | 15-313 |
| Cow position: | chr12:14548047-14548341 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 17-252 |
| Cow position: | chr12:26292876-26292639 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 17-268 |
| Cow position: | chr12:5250955-5251207 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 109, 86 |
| Conread position: | 21-229 |
| Cow position: | chr12:39177852-39177645 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 34-406 |
| Cow position: | chr12:31016664-31017038 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 106 |
| Conread position: | 81-265 |
| Cow position: | chr12:28024873-28024688 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 98-299 |
| Cow position: | chr12:39940716-39940913 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 148, 13 |
| Conread position: | 442-636 |
| Cow position: | chr12:39552077-39552273 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 123 |
| Conread position: | 442-676 |
| Cow position: | chr12:4540035-4539804 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 95, 165 |
| Conread position: | 442-754 |
| Cow position: | chr12:21676543-21676215 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 468-921 |
| Cow position: | chr12:14354740-14354294 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 74, 190 |
| Conread position: | 859-1022 |
| Cow position: | chr12:16892770-16892604 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 138 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 859-1023 |
| Cow position: | chr12:39552459-39552625 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 863-1008 |
| Cow position: | chr12:4536410-4536264 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 58 |
| Conread position: | 867-1023 |
| Cow position: | chr12:27134313-27134466 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 86, 40 |
Show alignments to all cow chromosomes.