Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-156 |
| Cow position: | chr14:36328613-36328768 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 1-163 |
| Cow position: | chr14:46564525-46564685 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-229 |
| Cow position: | chr14:9580625-9580398 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 116, 8 |
| Conread position: | 1-234 |
| Cow position: | chr14:2326421-2326649 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 1-255 |
| Cow position: | chr14:20808053-20808308 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 1-265 |
| Cow position: | chr14:3926104-3925834 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 1-268 |
| Cow position: | chr14:43220133-43219876 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-275 |
| Cow position: | chr14:43375891-43375625 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 1-276 |
| Cow position: | chr14:7116095-7115814 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 1-281 |
| Cow position: | chr14:35172933-35172660 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 1-301 |
| Cow position: | chr14:20883422-20883133 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 1-312 |
| Cow position: | chr14:36358042-36357729 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 1-312 |
| Cow position: | chr14:48580176-48579858 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 3-313 |
| Cow position: | chr14:23880303-23880619 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 5-309 |
| Cow position: | chr14:3168193-3168506 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 83 |
| Conread position: | 6-309 |
| Cow position: | chr14:32797563-32797874 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 99 |
| Conread position: | 10-276 |
| Cow position: | chr14:23149000-23148746 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 12-269 |
| Cow position: | chr14:33436219-33436483 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 12-307 |
| Cow position: | chr14:12676492-12676194 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 93, 139 |
| Conread position: | 14-208 |
| Cow position: | chr14:26130721-26130525 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 90 |
| Conread position: | 16-151 |
| Cow position: | chr14:43200339-43200205 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 29-260 |
| Cow position: | chr14:3094572-3094804 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 120, 74 |
| Conread position: | 36-276 |
| Cow position: | chr14:47151723-47151967 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 116 |
| Conread position: | 140-406 |
| Cow position: | chr14:33109998-33110256 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 446-733 |
| Cow position: | chr14:40036532-40036818 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 15 |
| Conread position: | 489-706 |
| Cow position: | chr14:35049714-35049929 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 874-1023 |
| Cow position: | chr14:1453298-1453153 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 37 |
Show alignments to all cow chromosomes.