Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-90 |
| Cow position: | chr16:10629814-10629724 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-229 |
| Cow position: | chr16:16834083-16833857 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 1-238 |
| Cow position: | chr16:15257964-15258201 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 1-243 |
| Cow position: | chr16:11484454-11484696 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 1-251 |
| Cow position: | chr16:31529392-31529145 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 7, 122 |
| Conread position: | 1-252 |
| Cow position: | chr16:24586600-24586855 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 1-281 |
| Cow position: | chr16:13924720-13924997 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 1-281 |
| Cow position: | chr16:33439216-33439485 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 247, 8 |
| Conread position: | 1-295 |
| Cow position: | chr16:50231290-50231007 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 1-310 |
| Cow position: | chr16:33872247-33871940 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 100 |
| Conread position: | 1-330 |
| Cow position: | chr16:52864147-52864476 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 1-367 |
| Cow position: | chr16:56079053-56078708 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 1-372 |
| Cow position: | chr16:40511622-40511244 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 1-375 |
| Cow position: | chr16:21725642-21726018 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 249, 11 |
| Conread position: | 1-407 |
| Cow position: | chr16:10337305-10337709 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 3-246 |
| Cow position: | chr16:14182918-14182680 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 12-238 |
| Cow position: | chr16:53495263-53495484 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 87 |
| Conread position: | 17-259 |
| Cow position: | chr16:34027981-34028221 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 71, 87 |
| Conread position: | 17-376 |
| Cow position: | chr16:43860913-43861290 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 125, 86 |
| Conread position: | 18-220 |
| Cow position: | chr16:54637676-54637479 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 132-342 |
| Cow position: | chr16:30577393-30577604 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 90 |
| Conread position: | 150-406 |
| Cow position: | chr16:10629699-10629438 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 186-400 |
| Cow position: | chr16:7391300-7391513 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 436-755 |
| Cow position: | chr16:23846896-23847226 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 441-926 |
| Cow position: | chr16:54637002-54636518 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 309 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 103, 304 |
| Conread position: | 442-755 |
| Cow position: | chr16:5650993-5650670 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 446-675 |
| Cow position: | chr16:13878090-13878323 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 64, 137 |
| Conread position: | 446-675 |
| Cow position: | chr16:52619612-52619844 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 136 |
| Conread position: | 449-726 |
| Cow position: | chr16:412488-412777 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 130 |
| Conread position: | 573-753 |
| Cow position: | chr16:1411351-1411172 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 151, 64 |
| Conread position: | 859-1023 |
| Cow position: | chr16:3140505-3140671 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 859-1029 |
| Cow position: | chr16:412902-413079 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 173 |
| Conread position: | 863-1023 |
| Cow position: | chr16:1631181-1631019 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 100 |
| Conread position: | 867-1023 |
| Cow position: | chr16:40412943-40412789 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 44 |
Show alignments to all cow chromosomes.