Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-245 |
| Cow position: | chr17:25650476-25650726 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 11 |
| Conread position: | 1-276 |
| Cow position: | chr17:17298170-17297898 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 1-281 |
| Cow position: | chr17:21920656-21920925 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 1-281 |
| Cow position: | chr17:34377874-34377600 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 141, 11 |
| Conread position: | 1-298 |
| Cow position: | chr17:4187398-4187105 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 1-313 |
| Cow position: | chr17:26615001-26615326 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 111, 51 |
| Conread position: | 1-382 |
| Cow position: | chr17:17939029-17938643 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 253, 103 |
| Conread position: | 5-229 |
| Cow position: | chr17:36204772-36204993 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 208, 81 |
| Conread position: | 11-380 |
| Cow position: | chr17:35448889-35449256 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 218, 42 |
| Conread position: | 12-405 |
| Cow position: | chr17:32148158-32147765 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 36 |
| Conread position: | 17-281 |
| Cow position: | chr17:11076125-11075864 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 119, 70 |
| Conread position: | 19-407 |
| Cow position: | chr17:17073636-17073242 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 20-268 |
| Cow position: | chr17:32155134-32154894 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 167, 50 |
| Conread position: | 24-278 |
| Cow position: | chr17:5130-5374 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 111-313 |
| Cow position: | chr17:37707832-37707625 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 172 |
| Conread position: | 126-301 |
| Cow position: | chr17:37710854-37710678 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 129-381 |
| Cow position: | chr17:16952754-16953012 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 60, 138 |
| Conread position: | 420-755 |
| Cow position: | chr17:21840004-21839670 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 205 |
| Conread position: | 550-677 |
| Cow position: | chr17:4736909-4737038 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 859-1023 |
| Cow position: | chr17:15918864-15918701 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 83, 122 |
Show alignments to all cow chromosomes.