Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-140 |
| Cow position: | chr18:36461507-36461369 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 111 |
| Conread position: | 1-228 |
| Cow position: | chr18:9017979-9017753 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 1-276 |
| Cow position: | chr18:52393012-52393283 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 1-307 |
| Cow position: | chr18:16065000-16064710 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 4-281 |
| Cow position: | chr18:4494712-4494976 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 165, 36 |
| Conread position: | 5-376 |
| Cow position: | chr18:25694465-25694077 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 9-274 |
| Cow position: | chr18:8691407-8691664 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 10 |
| Conread position: | 11-286 |
| Cow position: | chr18:49646523-49646787 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 175, 16 |
| Conread position: | 15-274 |
| Cow position: | chr18:21737062-21737315 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 17-291 |
| Cow position: | chr18:25700924-25700656 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 86 |
| Conread position: | 19-278 |
| Cow position: | chr18:35087276-35087024 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 77, 67 |
| Conread position: | 19-410 |
| Cow position: | chr18:42808666-42809047 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 122 |
| Conread position: | 23-252 |
| Cow position: | chr18:13788525-13788295 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 24-406 |
| Cow position: | chr18:22418996-22418598 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 118, 69 |
| Conread position: | 42-306 |
| Cow position: | chr18:13729837-13729582 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 144, 71 |
| Conread position: | 50-274 |
| Cow position: | chr18:50056523-50056750 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 304-638 |
| Cow position: | chr18:17800327-17799995 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 859-1008 |
| Cow position: | chr18:16053816-16053668 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 83, 122 |
| Conread position: | 859-1023 |
| Cow position: | chr18:43111423-43111593 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 865-1023 |
| Cow position: | chr18:32298025-32297868 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 867-1023 |
| Cow position: | chr18:15939400-15939553 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 86, 40 |
| Conread position: | 874-1023 |
| Cow position: | chr18:14075051-14074905 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 79, 33 |
Show alignments to all cow chromosomes.