Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-233 |
| Cow position: | chr21:36209724-36209956 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 1-238 |
| Cow position: | chr21:22520289-22520521 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 78, 104 |
| Conread position: | 1-246 |
| Cow position: | chr21:7402470-7402712 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 132, 102 |
| Conread position: | 1-256 |
| Cow position: | chr21:18485544-18485798 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 1-268 |
| Cow position: | chr21:47955690-47955428 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 104 |
| Conread position: | 1-276 |
| Cow position: | chr21:37260266-37260534 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 1-281 |
| Cow position: | chr21:42853406-42853683 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 1-361 |
| Cow position: | chr21:14787159-14787525 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 16 |
| Conread position: | 1-376 |
| Cow position: | chr21:19092318-19092700 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 8 |
| Conread position: | 3-265 |
| Cow position: | chr21:19866610-19866870 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 3-269 |
| Cow position: | chr21:32459748-32460012 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 5-269 |
| Cow position: | chr21:36210354-36210615 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 7-392 |
| Cow position: | chr21:35448698-35448309 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 179, 39 |
| Conread position: | 10-268 |
| Cow position: | chr21:32920154-32919904 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 173, 100 |
| Conread position: | 15-286 |
| Cow position: | chr21:32040193-32040456 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 154, 80 |
| Conread position: | 16-238 |
| Cow position: | chr21:23236486-23236708 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 118 |
| Conread position: | 17-245 |
| Cow position: | chr21:13861262-13861039 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 125, 86 |
| Conread position: | 30-281 |
| Cow position: | chr21:17787947-17788198 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 48-362 |
| Cow position: | chr21:25564890-25564570 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 91-298 |
| Cow position: | chr21:17085324-17085531 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 166 |
| Conread position: | 148-274 |
| Cow position: | chr21:44558677-44558804 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 442-637 |
| Cow position: | chr21:47962413-47962212 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 143 |
| Conread position: | 446-659 |
| Cow position: | chr21:3475153-3474933 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 91, 137 |
| Conread position: | 446-675 |
| Cow position: | chr21:41565820-41565587 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 858-1023 |
| Cow position: | chr21:47962028-47961853 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 859-1023 |
| Cow position: | chr21:3474773-3474606 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 863-1000 |
| Cow position: | chr21:23237425-23237564 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.