Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-194 |
| Cow position: | chr25:15959645-15959833 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-267 |
| Cow position: | chr25:21516743-21516482 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 139 |
| Conread position: | 1-335 |
| Cow position: | chr25:35401408-35401089 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-401 |
| Cow position: | chr25:31617355-31616932 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 292 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 7, 49 |
| Conread position: | 2-281 |
| Cow position: | chr25:26100262-26099989 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 115, 10 |
| Conread position: | 2-308 |
| Cow position: | chr25:17374136-17374434 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 10 |
| Conread position: | 3-164 |
| Cow position: | chr25:15632252-15632412 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 6-378 |
| Cow position: | chr25:15914581-15914971 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 5, 99 |
| Conread position: | 13-309 |
| Cow position: | chr25:41167556-41167851 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 106, 53 |
| Conread position: | 17-280 |
| Cow position: | chr25:6261392-6261650 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 71, 86 |
| Conread position: | 34-381 |
| Cow position: | chr25:15654160-15653805 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 39-286 |
| Cow position: | chr25:21517024-21516789 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 149, 91 |
| Conread position: | 123-443 |
| Cow position: | chr25:4506533-4506859 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 131, 266 |
| Conread position: | 304-636 |
| Cow position: | chr25:19017688-19017343 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 108, 56 |
| Conread position: | 436-696 |
| Cow position: | chr25:1036279-1036543 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 441-634 |
| Cow position: | chr25:479919-479720 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 446-675 |
| Cow position: | chr25:31368257-31368488 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 859-1008 |
| Cow position: | chr25:41329277-41329429 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.