Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-237 |
| Cow position: | chr28:6049404-6049636 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-238 |
| Cow position: | chr28:17527882-17528116 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 104 |
| Conread position: | 1-269 |
| Cow position: | chr28:33200892-33201157 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 1-281 |
| Cow position: | chr28:513516-513788 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 1-281 |
| Cow position: | chr28:23344249-23344527 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 1-281 |
| Cow position: | chr28:28731069-28730797 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 16 |
| Conread position: | 1-726 |
| Cow position: | chr28:3774360-3775103 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 476 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 5-217 |
| Cow position: | chr28:4567854-4567646 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 101 |
| Conread position: | 9-313 |
| Cow position: | chr28:11464395-11464091 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 105 |
| Conread position: | 24-410 |
| Cow position: | chr28:19380941-19381331 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 121 |
| Conread position: | 25-300 |
| Cow position: | chr28:15724237-15724509 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 51-401 |
| Cow position: | chr28:28624883-28625246 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 442-726 |
| Cow position: | chr28:33914746-33915041 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 442-733 |
| Cow position: | chr28:74726-75012 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 446-675 |
| Cow position: | chr28:5341306-5341538 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 138 |
| Conread position: | 461-723 |
| Cow position: | chr28:18147494-18147758 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 55, 134 |
| Conread position: | 866-1022 |
| Cow position: | chr28:34735464-34735306 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 875-1023 |
| Cow position: | chr28:33915309-33915459 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 127, 76 |
Show alignments to all cow chromosomes.