Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-173 |
| Cow position: | chr4:14479993-14480166 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 141, 87 |
| Conread position: | 1-208 |
| Cow position: | chr4:34324091-34324308 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 1-247 |
| Cow position: | chr4:36494054-36494298 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 1-252 |
| Cow position: | chr4:13150705-13150458 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 1-252 |
| Cow position: | chr4:43420433-43420681 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 247, 16 |
| Conread position: | 1-276 |
| Cow position: | chr4:3901983-3901716 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 1-276 |
| Cow position: | chr4:37857168-37857438 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 1-280 |
| Cow position: | chr4:3464145-3463876 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 1-281 |
| Cow position: | chr4:18797396-18797670 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 1-281 |
| Cow position: | chr4:44086324-44086055 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 87 |
| Conread position: | 1-281 |
| Cow position: | chr4:60093726-60093997 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 125, 16 |
| Conread position: | 1-287 |
| Cow position: | chr4:14422239-14422530 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 110 |
| Conread position: | 1-309 |
| Cow position: | chr4:12702241-12701934 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 1-406 |
| Cow position: | chr4:56263507-56263892 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 2-407 |
| Cow position: | chr4:28229979-28229578 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 170, 40 |
| Conread position: | 3-411 |
| Cow position: | chr4:65944311-65944725 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 5-246 |
| Cow position: | chr4:59531958-59531716 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 9-313 |
| Cow position: | chr4:39086255-39086559 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 180 |
| Conread position: | 11-276 |
| Cow position: | chr4:59857896-59858150 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 101 |
| Conread position: | 17-252 |
| Cow position: | chr4:45451684-45451452 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 17-377 |
| Cow position: | chr4:10979959-10980325 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 67-276 |
| Cow position: | chr4:32843821-32844025 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 71-296 |
| Cow position: | chr4:3899422-3899216 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 137-313 |
| Cow position: | chr4:60499939-60499756 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 148-307 |
| Cow position: | chr4:25153236-25153080 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 439-651 |
| Cow position: | chr4:14947173-14946957 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 205 |
| Conread position: | 442-633 |
| Cow position: | chr4:14528601-14528798 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 140 |
| Conread position: | 442-667 |
| Cow position: | chr4:7140500-7140272 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 117 |
| Conread position: | 442-689 |
| Cow position: | chr4:28871655-28871909 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 89, 137 |
| Conread position: | 446-726 |
| Cow position: | chr4:21870054-21870334 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 144, 99 |
| Conread position: | 456-677 |
| Cow position: | chr4:23122810-23123029 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 468-659 |
| Cow position: | chr4:5229043-5229240 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 115 |
| Conread position: | 859-1023 |
| Cow position: | chr4:5229395-5229561 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 859-1023 |
| Cow position: | chr4:57718040-57718212 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.