Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-171 |
| Cow position: | chr6:56911333-56911161 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 1-218 |
| Cow position: | chr6:60794711-60794928 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 8 |
| Conread position: | 1-246 |
| Cow position: | chr6:11177456-11177217 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 1-269 |
| Cow position: | chr6:2848820-2849073 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 184, 49 |
| Conread position: | 1-269 |
| Cow position: | chr6:69053810-69054083 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 1-307 |
| Cow position: | chr6:16548763-16549077 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 220 |
| Conread position: | 1-376 |
| Cow position: | chr6:37390052-37390435 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 94, 103 |
| Conread position: | 1-378 |
| Cow position: | chr6:61435992-61436376 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 162, 11 |
| Conread position: | 1-410 |
| Cow position: | chr6:50265713-50266134 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 78, 11 |
| Conread position: | 4-238 |
| Cow position: | chr6:47228586-47228823 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 80 |
| Conread position: | 4-294 |
| Cow position: | chr6:19353862-19353573 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 9-270 |
| Cow position: | chr6:29678739-29678988 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 103 |
| Conread position: | 11-215 |
| Cow position: | chr6:8018398-8018598 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 99 |
| Conread position: | 13-286 |
| Cow position: | chr6:32687898-32688156 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 13-366 |
| Cow position: | chr6:28598354-28598708 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 112, 70 |
| Conread position: | 15-269 |
| Cow position: | chr6:35187769-35187530 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 17-164 |
| Cow position: | chr6:62994303-62994156 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 33-411 |
| Cow position: | chr6:38823639-38824028 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 190 |
| Conread position: | 185-382 |
| Cow position: | chr6:1572212-1572006 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 114, 92 |
| Conread position: | 442-659 |
| Cow position: | chr6:23900074-23900299 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 142 |
| Conread position: | 489-677 |
| Cow position: | chr6:45340362-45340547 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 859-1023 |
| Cow position: | chr6:23900457-23900626 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 863-1023 |
| Cow position: | chr6:19404796-19404633 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.