Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G030010.5 |
| Conread position: | 1-165 |
| Cow position: | chr8:3551941-3552102 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-228 |
| Cow position: | chr8:45965944-45966168 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 1-252 |
| Cow position: | chr8:9701721-9701473 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 107, 11 |
| Conread position: | 1-281 |
| Cow position: | chr8:48454637-48454921 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 1-307 |
| Cow position: | chr8:6356948-6356640 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 1-367 |
| Cow position: | chr8:20660762-20661109 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 184, 100 |
| Conread position: | 2-281 |
| Cow position: | chr8:36296056-36296329 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 123, 7 |
| Conread position: | 3-208 |
| Cow position: | chr8:61169063-61168857 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 3-281 |
| Cow position: | chr8:7419357-7419089 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 3-300 |
| Cow position: | chr8:49454474-49454771 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 88, 48 |
| Conread position: | 12-406 |
| Cow position: | chr8:19024658-19025052 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 99 |
| Conread position: | 15-267 |
| Cow position: | chr8:51902892-51902633 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 17-246 |
| Cow position: | chr8:1103234-1103011 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 17-246 |
| Cow position: | chr8:25585272-25585050 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 125, 61 |
| Conread position: | 17-246 |
| Cow position: | chr8:39880959-39880732 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 108, 86 |
| Conread position: | 18-246 |
| Cow position: | chr8:40113985-40113758 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 21-301 |
| Cow position: | chr8:16231713-16231425 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 25-252 |
| Cow position: | chr8:14961433-14961214 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 87 |
| Conread position: | 116-258 |
| Cow position: | chr8:51519696-51519553 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 193-406 |
| Cow position: | chr8:19818345-19818554 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 307-637 |
| Cow position: | chr8:26079637-26079289 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 146 |
| Conread position: | 442-726 |
| Cow position: | chr8:21986163-21985887 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 147, 112 |
| Conread position: | 446-649 |
| Cow position: | chr8:37094920-37095127 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 446-675 |
| Cow position: | chr8:24566044-24565812 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 131 |
| Conread position: | 859-1000 |
| Cow position: | chr8:37095534-37095676 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 859-1023 |
| Cow position: | chr8:26828302-26828138 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 125 |
| Conread position: | 867-1020 |
| Cow position: | chr8:21985544-21985394 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 871-967 |
| Cow position: | chr8:26078590-26078493 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.