Cow genome map


           Conread name:
           Ss1.1-LyN1-MLN01H080052.5
        

               Conread position:
               359-718
               

               Cow position:
               chr29:24156746-24156381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               364-719
               

               Cow position:
               chr29:32982781-32982412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               719-863
               

               Cow position:
               chr29:5053509-5053653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               27, 125
               

               Conread position:
               720-857
               

               Cow position:
               chr29:1994704-1994573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               721-871
               

               Cow position:
               chr29:34287379-34287528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               724-863
               

               Cow position:
               chr29:25117334-25117473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               725-864
               

               Cow position:
               chr29:33101909-33101767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               731-864
               

               Cow position:
               chr29:6437825-6437691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               741-864
               

               Cow position:
               chr29:23000942-23001063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               746-864
               

               Cow position:
               chr29:21205379-21205260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               11, 0
               
Show alignments to all cow chromosomes.