Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01H080052.5 |
| Conread position: | 358-719 |
| Cow position: | chr6:6033462-6033095 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 359-703 |
| Cow position: | chr6:3360044-3360386 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 6, 54 |
| Conread position: | 364-718 |
| Cow position: | chr6:17424325-17423976 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 365-715 |
| Cow position: | chr6:65382411-65382067 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 140, 35 |
| Conread position: | 378-695 |
| Cow position: | chr6:64816842-64817144 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 421-719 |
| Cow position: | chr6:59330390-59330697 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 237 |
| Conread position: | 719-864 |
| Cow position: | chr6:36826457-36826312 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 720-864 |
| Cow position: | chr6:48473523-48473377 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 720-874 |
| Cow position: | chr6:14165014-14165167 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 721-871 |
| Cow position: | chr6:48669430-48669581 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 724-864 |
| Cow position: | chr6:38981775-38981915 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 724-864 |
| Cow position: | chr6:53380959-53380823 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 725-864 |
| Cow position: | chr6:47527113-47526974 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 731-864 |
| Cow position: | chr6:49721255-49721121 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 100, 7 |
| Conread position: | 738-860 |
| Cow position: | chr6:23008376-23008498 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-862 |
| Cow position: | chr6:23811379-23811258 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 745-871 |
| Cow position: | chr6:3515814-3515688 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 752-876 |
| Cow position: | chr6:42253071-42252945 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.