Cow genome map


           Conread name:
           Ss1.1-Lym1-jns06_G12.r.3
        

               Conread position:
               18-190
               

               Cow position:
               chr20:11946136-11946308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               18-203
               

               Cow position:
               chr20:41351936-41351750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               18-221
               

               Cow position:
               chr20:14825381-14825587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               18-225
               

               Cow position:
               chr20:7612175-7612380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               19-207
               

               Cow position:
               chr20:28105388-28105573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 117
               

               Conread position:
               19-211
               

               Cow position:
               chr20:10566970-10567161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 131
               

               Conread position:
               19-216
               

               Cow position:
               chr20:34416776-34416580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               19-225
               

               Cow position:
               chr20:33708869-33708662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               20-139
               

               Cow position:
               chr20:4988924-4989039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               59-221
               

               Cow position:
               chr20:2272502-2272664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 145
               
Show alignments to all cow chromosomes.