Cow genome map


           Conread name:
           Ss1.1-Lym1-jns06_G12.r.3
        

               Conread position:
               17-206
               

               Cow position:
               chr22:45483957-45483766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               18-181
               

               Cow position:
               chr22:18426741-18426906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               18-212
               

               Cow position:
               chr22:33756502-33756692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               18-213
               

               Cow position:
               chr22:18140231-18140428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 191
               

               Conread position:
               18-217
               

               Cow position:
               chr22:34680952-34680753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               31-226
               

               Cow position:
               chr22:44030617-44030817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               40-223
               

               Cow position:
               chr22:23765813-23765630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               32, 144
               

               Conread position:
               49-234
               

               Cow position:
               chr22:7870447-7870635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.