Cow genome map
| Conread name: | Ss1.1-Lym1-jns06_G12.r.3 |
| Conread position: | 12-216 |
| Cow position: | chr3:38751922-38751717 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 99 |
| Conread position: | 12-221 |
| Cow position: | chr3:40770380-40770589 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 12-229 |
| Cow position: | chr3:72788343-72788559 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 156 |
| Conread position: | 18-147 |
| Cow position: | chr3:41554943-41555072 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 18-195 |
| Cow position: | chr3:48320732-48320909 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 146 |
| Conread position: | 18-210 |
| Cow position: | chr3:9457339-9457146 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 18-216 |
| Cow position: | chr3:36142594-36142395 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 18-219 |
| Cow position: | chr3:28878052-28877854 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 18-221 |
| Cow position: | chr3:7444902-7444698 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 18-221 |
| Cow position: | chr3:25038829-25038625 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 18-221 |
| Cow position: | chr3:37346547-37346347 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 18-225 |
| Cow position: | chr3:47960680-47960473 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 190 |
| Conread position: | 18-228 |
| Cow position: | chr3:14197761-14197551 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 18-234 |
| Cow position: | chr3:59836246-59836463 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 194 |
| Conread position: | 19-222 |
| Cow position: | chr3:25026828-25027036 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 20-202 |
| Cow position: | chr3:35336724-35336542 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 144 |
| Conread position: | 20-216 |
| Cow position: | chr3:36699327-36699524 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 151 |
| Conread position: | 21-221 |
| Cow position: | chr3:15207744-15207942 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 22-216 |
| Cow position: | chr3:53584961-53585153 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 25-223 |
| Cow position: | chr3:35876712-35876915 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 31-216 |
| Cow position: | chr3:74215864-74216051 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 34-225 |
| Cow position: | chr3:33240414-33240229 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 38-211 |
| Cow position: | chr3:45956366-45956542 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 79-225 |
| Cow position: | chr3:63758334-63758187 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.