Cow genome map


           Conread name:
           Ss1.1-Lym1-jns06_G12.r.3
        

               Conread position:
               9-230
               

               Cow position:
               chr8:44300983-44301200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               199, 136
               

               Conread position:
               13-225
               

               Cow position:
               chr8:42664169-42663963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               18-234
               

               Cow position:
               chr8:30044286-30044065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               18-236
               

               Cow position:
               chr8:43028834-43028622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               19-212
               

               Cow position:
               chr8:46304541-46304356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               166, 17
               

               Conread position:
               19-216
               

               Cow position:
               chr8:24800913-24800722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               31-210
               

               Cow position:
               chr8:14068474-14068653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 8
               
Show alignments to all cow chromosomes.