Cow genome map
| Conread name: | Ss1.1-Lym1-jns06_G12.r.3 |
| Conread position: | 3-202 |
| Cow position: | chrX:46277562-46277761 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 185, 179 |
| Conread position: | 10-188 |
| Cow position: | chrX:30433757-30433579 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 17-212 |
| Cow position: | chrX:47636990-47636787 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 132 |
| Conread position: | 18-178 |
| Cow position: | chrX:1075374-1075535 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 18-213 |
| Cow position: | chrX:31748542-31748350 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 154, 50 |
| Conread position: | 18-213 |
| Cow position: | chrX:40165419-40165612 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 18-216 |
| Cow position: | chrX:3848986-3849183 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 18, 147 |
| Conread position: | 18-216 |
| Cow position: | chrX:35003629-35003826 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 18-222 |
| Cow position: | chrX:8277948-8277747 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 18-222 |
| Cow position: | chrX:16560280-16560081 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 18-222 |
| Cow position: | chrX:30483072-30482864 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 18-225 |
| Cow position: | chrX:7979073-7978862 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 205 |
| Conread position: | 18-234 |
| Cow position: | chrX:27403314-27403096 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 127 |
| Conread position: | 19-208 |
| Cow position: | chrX:23194062-23193869 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 19-221 |
| Cow position: | chrX:15605060-15604858 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 139, 48 |
| Conread position: | 22-272 |
| Cow position: | chrX:38325267-38325516 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 51, 127 |
Show alignments to all cow chromosomes.