Cow genome map


           Conread name:
           Ss1.1-Lym2-sn53_A09.f.5
        

               Conread position:
               1-350
               

               Cow position:
               chr3:75190236-75190585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 18
               

               Conread position:
               2-435
               

               Cow position:
               chr3:5120429-5119988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 0
               

               Conread position:
               3-339
               

               Cow position:
               chr3:43331569-43331233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-344
               

               Cow position:
               chr3:8194493-8194183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 64
               

               Conread position:
               31-344
               

               Cow position:
               chr3:16292228-16292540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               31-346
               

               Cow position:
               chr3:27171998-27171681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 90
               
Show alignments to all cow chromosomes.