Cow genome map
| Conread name: | Ss1.1-Mixc-0029b12.3 | 
| Conread position: | 3-1051 | 
| Cow position: | chr3:17591881-17592903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 1058 | 
| Alignm identity: | 891 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 454, 19 | 
| Conread position: | 13-405 | 
| Cow position: | chr3:1077437-1077830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 215 | 
| Conread position: | 14-424 | 
| Cow position: | chr3:17645404-17645816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 25-407 | 
| Cow position: | chr3:62478434-62478052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 29-410 | 
| Cow position: | chr3:62431042-62430661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 29-416 | 
| Cow position: | chr3:62448578-62448965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 29-484 | 
| Cow position: | chr3:62459268-62458820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 383, 0 | 
| Conread position: | 29-498 | 
| Cow position: | chr3:17614442-17614912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 429, 0 | 
| Conread position: | 29-498 | 
| Cow position: | chr3:17624754-17624284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 429, 0 | 
| Conread position: | 277-407 | 
| Cow position: | chr3:56588624-56588752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 1050-1811 | 
| Cow position: | chr3:17592931-17593727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 817 | 
| Alignm identity: | 583 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 169 | 
| Conread position: | 1797-2174 | 
| Cow position: | chr3:17593823-17594198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 131, 45 | 
Show alignments to all cow chromosomes.
