Cow genome map

Conread name: Ss1.1-Mixg-0001c04.3

Conread position: 1-121
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 3-143
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 3-145
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 134, 0

Conread position: 3-147
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-155
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-168
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 155, 77

Conread position: 3-175
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-178
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-178
Cow position:
Alignm length: 176
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-181
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 10

Conread position: 3-183
Cow position:
Alignm length: 181
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 44, 0

Conread position: 3-183
Cow position:
Alignm length: 181
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position:
Alignm length: 183
Alignm identity: 150
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 134, 0

Conread position: 3-183
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 56

Conread position: 3-183
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 172, 103

Conread position: 3-183
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 89, 0

Conread position: 3-184
Cow position:
Alignm length: 182
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-185
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 166, 68

Conread position: 3-190
Cow position:
Alignm length: 188
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-191
Cow position:
Alignm length: 189
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 3-191
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 156

Conread position: 3-191
Cow position:
Alignm length: 189
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 152, 0

Conread position: 3-194
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 156

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 191, 139

Conread position: 4-166
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 4-191
Cow position:
Alignm length: 188
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-179
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 5-198
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 145, 110

Conread position: 7-184
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 141, 48

Conread position: 8-127
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 8-127
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 8-128
Cow position:
Alignm length: 121
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 8-142
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 8-145
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 65

Conread position: 8-147
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 8-148
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 8-149
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 58

Conread position: 8-149
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 8-150
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 8-150
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 8-152
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 8-153
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 8-155
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 8-155
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 8-157
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-160
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 63

Conread position: 8-164
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 8-164
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 8-167
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 150

Conread position: 8-168
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 8-168
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 8-171
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 8-172
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 8-172
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 8-172
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 84, 47

Conread position: 8-173
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 8-173
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 147, 0

Conread position: 8-173
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 83

Conread position: 8-174
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-175
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 8-176
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 89

Conread position: 8-177
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 47, 0

Conread position: 8-177
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 8-178
Cow position:
Alignm length: 171
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 8-178
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 8-179
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 50

Conread position: 8-179
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 8-179
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 11

Conread position: 8-179
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 8-181
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 70

Conread position: 8-181
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 8-182
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 8-182
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 8-182
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 59

Conread position: 8-182
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 8-182
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 8-182
Cow position:
Alignm length: 175
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-182
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 8-183
Cow position:
Alignm length: 176
Alignm identity: 141
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 8-183
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 8-183
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 8-183
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 127, 0

Conread position: 8-183
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 48

Conread position: 8-183
Cow position:
Alignm length: 176
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-183
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 8-183
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 46

Conread position: 8-183
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 8-183
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 8-183
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 8-184
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 8-184
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 8-184
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 8-184
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 149

Conread position: 8-184
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 8-184
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 8-184
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 8-184
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 8-184
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 8-184
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 39

Conread position: 8-184
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 8-184
Cow position:
Alignm length: 177
Alignm identity: 143
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 8-185
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 8-185
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 50, 116

Conread position: 8-187
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 8-190
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 8-191
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 8-191
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 8-191
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 8-191
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 8-191
Cow position:
Alignm length: 184
Alignm identity: 149
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 26, 0

Conread position: 8-191
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 164, 61

Conread position: 8-191
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 8-191
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 111

Conread position: 8-191
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 8-192
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 134

Conread position: 8-193
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 159, 63

Conread position: 8-197
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 177, 47

Conread position: 8-208
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 9-149
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 47

Conread position: 9-178
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 51

Conread position: 9-183
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 9-184
Cow position:
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 9-184
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 24

Conread position: 9-191
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 10-128
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 10-161
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 10-172
Cow position:
Alignm length: 165
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 65, 0

Conread position: 10-182
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 24

Conread position: 10-183
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-184
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 10-191
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 10-197
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 125

Conread position: 11-136
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 11-148
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 11-148
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 11-148
Cow position:
Alignm length: 140
Alignm identity: 103
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 0

Conread position: 11-149
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 11-149
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 11-149
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 11-152
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 11-155
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 11-160
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 102, 0

Conread position: 11-161
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 11-164
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 11-167
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 11-175
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 16

Conread position: 11-175
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 86

Conread position: 11-177
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 11-181
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 11-181
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 45

Conread position: 11-183
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 11-183
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 11-183
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 11-183
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 11-183
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 74

Conread position: 11-183
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 18

Conread position: 11-184
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 11-184
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 11-184
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 11-184
Cow position:
Alignm length: 174
Alignm identity: 142
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 11-184
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 11-185
Cow position:
Alignm length: 176
Alignm identity: 145
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 130, 0

Conread position: 11-190
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 11-205
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 92

Conread position: 11-209
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 12-148
Cow position:
Alignm length: 137
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 12-149
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 12-154
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-161
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 12-164
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 12-173
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 12-176
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 12-178
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 12-179
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 12-181
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 12-182
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 12-182
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 12-182
Cow position:
Alignm length: 171
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-183
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 12-183
Cow position:
Alignm length: 172
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-184
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-184
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 12-184
Cow position:
Alignm length: 173
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-184
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 143

Conread position: 12-184
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 12-185
Cow position:
Alignm length: 175
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 68, 0

Conread position: 12-192
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 13-175
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 158, 0

Conread position: 13-182
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 13-182
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 13-185
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-144
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-155
Cow position:
Alignm length: 142
Alignm identity: 115
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 14-158
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 14-168
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 14-179
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 14-182
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 120

Conread position: 14-182
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 14-183
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 106

Conread position: 14-183
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 148, 41

Conread position: 14-183
Cow position:
Alignm length: 170
Alignm identity: 136
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 14-185
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 158, 50

Conread position: 14-191
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 14-210
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 127

Conread position: 16-183
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 18-182
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 18-183
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 42

Conread position: 18-184
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 19-183
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 19-184
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 19-184
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 104

Conread position: 19-184
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 121

Conread position: 19-207
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 20-181
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 20-182
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 73, 0

Conread position: 20-184
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 20-191
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 20-191
Cow position:
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 21-184
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 27

Conread position: 21-184
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 161, 34

Conread position: 26-175
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 26-179
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 28-184
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 30-184
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 31-156
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 32-163
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 33-174
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 33-183
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 35-155
Cow position:
Alignm length: 122
Alignm identity: 103
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 35-191
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 116

Conread position: 36-149
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 37-183
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 41-177
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 42-173
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 61, 0

Conread position: 43-191
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 44-149
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 44-187
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 57

Conread position: 47-184
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 48-152
Cow position:
Alignm length: 105
Alignm identity: 84
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 48-167
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 48-178
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 48-182
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 48-182
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 48-182
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 48-183
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 48-184
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 48-184
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 48-184
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 48-184
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 76

Conread position: 48-184
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 43

Conread position: 48-184
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 48-191
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 48-207
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 0

Conread position: 49-180
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 49-184
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 49-184
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 49-185
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 101, 0

Conread position: 49-190
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 7, 0

Conread position: 51-182
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 37

Conread position: 53-184
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 55-173
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 55-182
Cow position:
Alignm length: 128
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 55-184
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 58

Conread position: 55-184
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 55-187
Cow position:
Alignm length: 133
Alignm identity: 110
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 56-169
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-171
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-175
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 56-182
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 56-183
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 57-153
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 57-183
Cow position:
Alignm length: 128
Alignm identity: 108
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 11

Conread position: 57-184
Cow position:
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 57-192
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 58-185
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 59-201
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 60-184
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 62-184
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 62-184
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 63-184
Cow position:
Alignm length: 122
Alignm identity: 105
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 64-156
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 64-182
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 65-182
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 67-182
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 68-173
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 68-183
Cow position:
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 70-183
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 71-185
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.