Cow genome map

Conread name: Ss1.1-Mixg-0001c04.3

Conread position: 1-182
Cow position: chr24:28990718-28990539 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 67, 57

Conread position: 1-183
Cow position: chr24:6008015-6008194 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 172, 7

Conread position: 1-184
Cow position: chr24:3494036-3493860 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 1-184
Cow position: chr24:19187087-19186918 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 2-181
Cow position: chr24:26848576-26848754 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 49

Conread position: 2-184
Cow position: chr24:41406059-41405866 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 2-190
Cow position: chr24:3542457-3542270 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 175, 0

Conread position: 3-149
Cow position: chr24:17060064-17060202 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 3-155
Cow position: chr24:17294041-17294192 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-156
Cow position: chr24:27271083-27270930 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-156
Cow position: chr24:36010580-36010424 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 117

Conread position: 3-161
Cow position: chr24:250381-250539 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-170
Cow position: chr24:20323344-20323512 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 3-172
Cow position: chr24:29587154-29586988 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 3-174
Cow position: chr24:37252311-37252145 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 60

Conread position: 3-174
Cow position: chr24:44776020-44776191 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-178
Cow position: chr24:21715195-21715369 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 3-178
Cow position: chr24:26880909-26880735 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 142, 0

Conread position: 3-182
Cow position: chr24:12121053-12120874 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-182
Cow position: chr24:44896195-44896017 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 176, 0

Conread position: 3-183
Cow position: chr24:6742379-6742198 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 3-183
Cow position: chr24:13586837-13587015 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 132, 52

Conread position: 3-183
Cow position: chr24:17308987-17309160 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 3-183
Cow position: chr24:19730936-19730756 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr24:19965922-19966099 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 3-183
Cow position: chr24:23863472-23863652 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr24:24810680-24810495 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 3-183
Cow position: chr24:37267819-37267639 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-188
Cow position: chr24:18401163-18401344 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 147, 0

Conread position: 3-191
Cow position: chr24:17407545-17407358 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 3-194
Cow position: chr24:6515277-6515467 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 187, 72

Conread position: 3-196
Cow position: chr24:22647182-22647376 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 24

Conread position: 3-199
Cow position: chr24:4822394-4822198 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 177, 190

Conread position: 3-206
Cow position: chr24:23575005-23575208 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-148
Cow position: chr24:11735918-11736059 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 5-154
Cow position: chr24:15448617-15448469 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 134, 0

Conread position: 5-170
Cow position: chr24:26569611-26569447 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 50

Conread position: 7-156
Cow position: chr24:36554551-36554694 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 8-126
Cow position: chr24:124711-124593 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-130
Cow position: chr24:43027072-43027197 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 8-139
Cow position: chr24:28476660-28476528 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 8-140
Cow position: chr24:38427961-38428093 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-143
Cow position: chr24:27719381-27719510 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 8-147
Cow position: chr24:11035364-11035493 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 8-148
Cow position: chr24:14373429-14373570 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 8-148
Cow position: chr24:15473678-15473537 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 47

Conread position: 8-148
Cow position: chr24:28234190-28234054 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 38

Conread position: 8-148
Cow position: chr24:30236021-30235882 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 8-149
Cow position: chr24:24013914-24013768 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 8-156
Cow position: chr24:25947710-25947858 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 8-159
Cow position: chr24:18702549-18702399 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 8-160
Cow position: chr24:38693728-38693880 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 135, 15

Conread position: 8-164
Cow position: chr24:28788007-28787850 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 64

Conread position: 8-167
Cow position: chr24:23046746-23046905 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-168
Cow position: chr24:18810983-18810825 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 147, 0

Conread position: 8-168
Cow position: chr24:25142766-25142601 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 8-171
Cow position: chr24:33098323-33098484 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 8-174
Cow position: chr24:18696031-18695865 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 152

Conread position: 8-174
Cow position: chr24:22887865-22888032 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 75

Conread position: 8-175
Cow position: chr24:32739114-32739285 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 99

Conread position: 8-176
Cow position: chr24:24490876-24491033 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 8-177
Cow position: chr24:27553249-27553078 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 45, 21

Conread position: 8-177
Cow position: chr24:44040862-44041022 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 8-179
Cow position: chr24:7757918-7757753 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 8-179
Cow position: chr24:16995027-16994861 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 148, 52

Conread position: 8-179
Cow position: chr24:40055360-40055530 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 0

Conread position: 8-179
Cow position: chr24:42194596-42194759 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 8-179
Cow position: chr24:42984544-42984372 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 8-180
Cow position: chr24:162155-161983 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 8-180
Cow position: chr24:18874671-18874841 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 90, 0

Conread position: 8-180
Cow position: chr24:39903859-39904024 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 8-181
Cow position: chr24:11036689-11036856 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 8-181
Cow position: chr24:14551609-14551446 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 47

Conread position: 8-181
Cow position: chr24:18405130-18405300 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 154, 63

Conread position: 8-181
Cow position: chr24:32609798-32609626 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 8-181
Cow position: chr24:33238105-33238286 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 8-181
Cow position: chr24:36286717-36286548 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 8-181
Cow position: chr24:43219927-43220095 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 8-182
Cow position: chr24:2261819-2261645 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 8-182
Cow position: chr24:13626435-13626261 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 48

Conread position: 8-182
Cow position: chr24:16641062-16640887 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 138, 0

Conread position: 8-182
Cow position: chr24:21524214-21524042 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 37

Conread position: 8-182
Cow position: chr24:22079612-22079441 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 8-182
Cow position: chr24:27844384-27844550 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 8-182
Cow position: chr24:30313880-30314048 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 47

Conread position: 8-182
Cow position: chr24:32230355-32230530 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 33

Conread position: 8-182
Cow position: chr24:37974834-37975003 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 48

Conread position: 8-182
Cow position: chr24:39304762-39304943 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 8-183
Cow position: chr24:390249-390081 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 8-183
Cow position: chr24:6740026-6740191 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 8-183
Cow position: chr24:8676974-8676800 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 8-183
Cow position: chr24:13888854-13888681 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 0

Conread position: 8-183
Cow position: chr24:14550939-14550772 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 8-183
Cow position: chr24:18730496-18730321 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-183
Cow position: chr24:18750859-18750680 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 154, 0

Conread position: 8-183
Cow position: chr24:19624014-19623833 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 51, 167

Conread position: 8-183
Cow position: chr24:19800988-19800824 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 8-183
Cow position: chr24:20801196-20801369 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 8-183
Cow position: chr24:21606527-21606696 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 8-183
Cow position: chr24:22194563-22194391 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 142, 47

Conread position: 8-183
Cow position: chr24:23556188-23556361 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 47

Conread position: 8-183
Cow position: chr24:25194415-25194242 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 8-183
Cow position: chr24:28342510-28342333 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 8-183
Cow position: chr24:34272968-34272786 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 8-184
Cow position: chr24:2992731-2992903 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 8-184
Cow position: chr24:5152675-5152499 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 8-184
Cow position: chr24:11836252-11836428 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-184
Cow position: chr24:15288976-15288803 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 8-184
Cow position: chr24:19637735-19637559 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 108, 47

Conread position: 8-184
Cow position: chr24:27202235-27202065 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 53

Conread position: 8-184
Cow position: chr24:27448799-27448620 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 87

Conread position: 8-184
Cow position: chr24:27906587-27906413 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 124, 27

Conread position: 8-184
Cow position: chr24:30229623-30229449 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 93, 47

Conread position: 8-184
Cow position: chr24:30483795-30483972 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 47

Conread position: 8-184
Cow position: chr24:31159779-31159595 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 159

Conread position: 8-184
Cow position: chr24:32204635-32204819 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 8-184
Cow position: chr24:39910882-39911058 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 145
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 163, 88

Conread position: 8-185
Cow position: chr24:27040199-27040023 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 8-185
Cow position: chr24:28722026-28721864 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 8-185
Cow position: chr24:34465344-34465531 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 8-186
Cow position: chr24:11028538-11028715 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 8-187
Cow position: chr24:27066379-27066203 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 8-187
Cow position: chr24:43832671-43832501 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 8-191
Cow position: chr24:21519579-21519398 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 111, 150

Conread position: 8-191
Cow position: chr24:44987223-44987406 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 8-205
Cow position: chr24:15353593-15353397 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 8-208
Cow position: chr24:18484844-18485040 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 81

Conread position: 9-130
Cow position: chr24:27386842-27386963 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-175
Cow position: chr24:17374574-17374410 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 9-183
Cow position: chr24:2693772-2693945 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 9-183
Cow position: chr24:43406108-43405936 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 9-184
Cow position: chr24:28700196-28700026 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 46

Conread position: 9-184
Cow position: chr24:39523302-39523473 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 9-191
Cow position: chr24:38006564-38006739 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 137

Conread position: 10-156
Cow position: chr24:34006060-34006205 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 10-182
Cow position: chr24:14989349-14989178 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 10-182
Cow position: chr24:28470517-28470702 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 10-184
Cow position: chr24:32890900-32891068 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 145
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 41, 0

Conread position: 10-190
Cow position: chr24:41244658-41244481 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 25

Conread position: 11-148
Cow position: chr24:41916403-41916271 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 11-149
Cow position: chr24:22221526-22221388 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-150
Cow position: chr24:26588364-26588230 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 11-164
Cow position: chr24:20017279-20017432 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 11-168
Cow position: chr24:35365561-35365712 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 41

Conread position: 11-176
Cow position: chr24:27713264-27713421 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 11-178
Cow position: chr24:16510118-16509959 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 11-178
Cow position: chr24:43028182-43028346 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 11-182
Cow position: chr24:20943306-20943146 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 11-182
Cow position: chr24:29539784-29539951 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 51

Conread position: 11-182
Cow position: chr24:34896555-34896721 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 11-183
Cow position: chr24:5447119-5447291 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-183
Cow position: chr24:5632270-5632444 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 127

Conread position: 11-183
Cow position: chr24:16645172-16645343 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 53

Conread position: 11-183
Cow position: chr24:19000189-19000024 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 11-183
Cow position: chr24:36303171-36303340 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 21

Conread position: 11-184
Cow position: chr24:15861445-15861622 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 130, 0

Conread position: 11-184
Cow position: chr24:33944552-33944377 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 11-184
Cow position: chr24:34301890-34302060 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 129, 0

Conread position: 11-184
Cow position: chr24:35310872-35310697 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 151, 69

Conread position: 11-184
Cow position: chr24:38478249-38478416 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 11-184
Cow position: chr24:41565954-41566119 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 11-191
Cow position: chr24:29782310-29782134 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 47

Conread position: 11-193
Cow position: chr24:5434917-5435100 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 11-197
Cow position: chr24:41423742-41423564 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 155, 39

Conread position: 11-198
Cow position: chr24:17751962-17752150 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 81

Conread position: 12-130
Cow position: chr24:18817534-18817416 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-139
Cow position: chr24:16303536-16303656 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 12-148
Cow position: chr24:27284969-27284828 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 12-152
Cow position: chr24:26808736-26808599 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 63

Conread position: 12-171
Cow position: chr24:18755905-18755746 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-173
Cow position: chr24:4635020-4635181 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-176
Cow position: chr24:7113378-7113206 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 12-176
Cow position: chr24:28600290-28600451 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 38

Conread position: 12-178
Cow position: chr24:43373207-43373046 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 44

Conread position: 12-179
Cow position: chr24:20225892-20225721 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 152

Conread position: 12-181
Cow position: chr24:18741420-18741593 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 12-181
Cow position: chr24:36485639-36485824 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 12-182
Cow position: chr24:17104424-17104592 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 12-182
Cow position: chr24:22133310-22133149 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 12-182
Cow position: chr24:24457094-24457272 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 84

Conread position: 12-183
Cow position: chr24:352459-352629 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 0

Conread position: 12-183
Cow position: chr24:17689463-17689634 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 82

Conread position: 12-183
Cow position: chr24:22420108-22419937 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 12-183
Cow position: chr24:22567251-22567080 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 120, 132

Conread position: 12-183
Cow position: chr24:26928796-26928967 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-183
Cow position: chr24:41980515-41980682 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 12-184
Cow position: chr24:18668728-18668554 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 126

Conread position: 12-184
Cow position: chr24:19535108-19535280 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-191
Cow position: chr24:16089377-16089197 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 82

Conread position: 13-124
Cow position: chr24:12241865-12241754 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-183
Cow position: chr24:42862769-42862601 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 13-184
Cow position: chr24:29677766-29677940 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 14-154
Cow position: chr24:27149527-27149389 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 14-182
Cow position: chr24:31816720-31816556 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 14-183
Cow position: chr24:10242637-10242806 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 14-183
Cow position: chr24:26001532-26001364 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 14-184
Cow position: chr24:42726603-42726426 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 14-186
Cow position: chr24:27810294-27810132 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 14-191
Cow position: chr24:12200264-12200440 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 14-191
Cow position: chr24:36711341-36711163 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 14-200
Cow position: chr24:43499803-43499620 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 86, 40

Conread position: 15-171
Cow position: chr24:398960-399113 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 18-141
Cow position: chr24:43445874-43445995 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 18-172
Cow position: chr24:35576396-35576550 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 54

Conread position: 18-183
Cow position: chr24:19599047-19598882 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-183
Cow position: chr24:37395068-37395234 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 65

Conread position: 18-184
Cow position: chr24:29605889-29606057 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 23

Conread position: 18-204
Cow position: chr24:40130277-40130085 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 182

Conread position: 19-136
Cow position: chr24:27791600-27791711 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 19-168
Cow position: chr24:39218405-39218560 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 19-173
Cow position: chr24:42008158-42008009 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 19-177
Cow position: chr24:9300768-9300611 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 79

Conread position: 19-183
Cow position: chr24:3656225-3656389 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-183
Cow position: chr24:32979033-32979191 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 19-184
Cow position: chr24:28690831-28690661 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 132

Conread position: 20-131
Cow position: chr24:3193134-3193244 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 20-173
Cow position: chr24:39960863-39961011 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 20-181
Cow position: chr24:31383249-31383099 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 20-184
Cow position: chr24:26554457-26554621 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 21-164
Cow position: chr24:10300216-10300072 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 21-164
Cow position: chr24:17832684-17832826 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 137, 34

Conread position: 22-184
Cow position: chr24:11840321-11840163 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 25-149
Cow position: chr24:34768435-34768557 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 26-170
Cow position: chr24:28063077-28062936 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 30

Conread position: 27-160
Cow position: chr24:3626934-3627067 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-183
Cow position: chr24:19465785-19465940 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 28-160
Cow position: chr24:15340325-15340454 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 28-184
Cow position: chr24:15347720-15347565 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 17

Conread position: 31-185
Cow position: chr24:21623354-21623200 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 124

Conread position: 33-173
Cow position: chr24:35249985-35250125 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 34-184
Cow position: chr24:7046635-7046773 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 34-184
Cow position: chr24:34742879-34742728 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 35-191
Cow position: chr24:6102954-6102799 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 112

Conread position: 36-179
Cow position: chr24:28024399-28024260 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 39-184
Cow position: chr24:34008452-34008597 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 124
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 41-169
Cow position: chr24:15557223-15557351 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 43-182
Cow position: chr24:18328359-18328494 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 45-183
Cow position: chr24:14648244-14648382 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 48-149
Cow position: chr24:10840808-10840909 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 48-163
Cow position: chr24:18390189-18390307 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 112

Conread position: 48-178
Cow position: chr24:22235579-22235449 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 48-180
Cow position: chr24:28326968-28327099 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 109

Conread position: 48-182
Cow position: chr24:15373517-15373383 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 48-184
Cow position: chr24:18313821-18313965 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 48-184
Cow position: chr24:40404700-40404832 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 48-191
Cow position: chr24:32071073-32070932 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 49-174
Cow position: chr24:29014077-29013952 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 49-182
Cow position: chr24:27290982-27290849 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 49-184
Cow position: chr24:19769606-19769465 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 49-184
Cow position: chr24:33465511-33465642 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 51-170
Cow position: chr24:256135-256016 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 51-176
Cow position: chr24:3631786-3631661 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 55-183
Cow position: chr24:33230779-33230647 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 55-184
Cow position: chr24:16895332-16895461 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 29

Conread position: 56-183
Cow position: chr24:30202927-30202801 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 56-184
Cow position: chr24:18331824-18331694 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 56-184
Cow position: chr24:29679207-29679334 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 96

Conread position: 56-188
Cow position: chr24:32818200-32818327 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 56-191
Cow position: chr24:41412193-41412325 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 56-197
Cow position: chr24:14786483-14786342 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 57-147
Cow position: chr24:43024363-43024273 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 59-181
Cow position: chr24:35469776-35469654 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 59-184
Cow position: chr24:17955344-17955468 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 90

Conread position: 64-184
Cow position: chr24:20969569-20969686 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 64-201
Cow position: chr24:41068356-41068220 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 72

Conread position: 65-183
Cow position: chr24:28289159-28289276 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 66-185
Cow position: chr24:34496218-34496096 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 66-191
Cow position: chr24:16268035-16268158 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 69-183
Cow position: chr24:15263967-15263852 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 72-162
Cow position: chr24:27800562-27800472 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.