Cow genome map

Conread name: Ss1.1-Mixg-0001c04.3

Conread position: 1-131
Cow position: chr29:7143477-7143346 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 7

Conread position: 1-185
Cow position: chr29:30441117-30440931 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 8

Conread position: 1-201
Cow position: chr29:26631227-26631028 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 7

Conread position: 1-208
Cow position: chr29:28775284-28775484 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 2-175
Cow position: chr29:40916986-40916815 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 134

Conread position: 3-118
Cow position: chr29:16164257-16164372 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr29:24119321-24119449 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-141
Cow position: chr29:11685346-11685208 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-150
Cow position: chr29:38732332-38732185 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-153
Cow position: chr29:8605761-8605906 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 3-161
Cow position: chr29:22577001-22577158 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 3-163
Cow position: chr29:35189786-35189626 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-169
Cow position: chr29:14746955-14746793 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 3-169
Cow position: chr29:23819207-23819377 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 3-177
Cow position: chr29:44684274-44684104 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 3-181
Cow position: chr29:25793318-25793147 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 3-181
Cow position: chr29:35677364-35677542 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr29:1933393-1933572 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 3-183
Cow position: chr29:2744092-2744268 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 3-183
Cow position: chr29:5109005-5109185 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 100

Conread position: 3-183
Cow position: chr29:17297315-17297135 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr29:21018567-21018747 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr29:23845017-23844837 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr29:23913220-23913394 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 3-183
Cow position: chr29:25475110-25474922 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 3-183
Cow position: chr29:27524656-27524836 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr29:28420934-28420755 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 145, 0

Conread position: 3-183
Cow position: chr29:30827585-30827405 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr29:32656613-32656432 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 154

Conread position: 3-183
Cow position: chr29:32894434-32894262 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 3-184
Cow position: chr29:15947346-15947165 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-184
Cow position: chr29:29578794-29578975 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-189
Cow position: chr29:14375702-14375888 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-191
Cow position: chr29:3549782-3549594 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-191
Cow position: chr29:14501772-14501584 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-191
Cow position: chr29:15944738-15944551 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 0

Conread position: 3-191
Cow position: chr29:16609927-16609739 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-191
Cow position: chr29:23114823-23115010 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 3-191
Cow position: chr29:31981999-31981822 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 3-191
Cow position: chr29:33511550-33511738 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-202
Cow position: chr29:32713341-32713141 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 0

Conread position: 3-204
Cow position: chr29:26211230-26211030 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 5-148
Cow position: chr29:2414575-2414718 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 5-180
Cow position: chr29:5953681-5953857 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 5-184
Cow position: chr29:4441030-4441207 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 153, 50

Conread position: 7-156
Cow position: chr29:42405122-42404973 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-183
Cow position: chr29:38347854-38348029 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 95

Conread position: 7-184
Cow position: chr29:7310836-7310675 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 8-125
Cow position: chr29:4741217-4741334 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-134
Cow position: chr29:10994683-10994560 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 8-139
Cow position: chr29:36357300-36357169 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 111
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 8-143
Cow position: chr29:30920228-30920364 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 19

Conread position: 8-148
Cow position: chr29:14828055-14828194 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 8-149
Cow position: chr29:25907424-25907279 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 8-149
Cow position: chr29:33143184-33143321 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 8-155
Cow position: chr29:28257314-28257168 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 8-156
Cow position: chr29:22652491-22652349 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 8-157
Cow position: chr29:10203941-10203797 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 8-158
Cow position: chr29:10191873-10192015 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 37

Conread position: 8-158
Cow position: chr29:23678873-23678734 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 8-161
Cow position: chr29:16735398-16735245 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 8-161
Cow position: chr29:37293199-37293060 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 8-171
Cow position: chr29:8798837-8799004 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 8-171
Cow position: chr29:21508175-21508338 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-171
Cow position: chr29:26602372-26602210 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 8-173
Cow position: chr29:17804702-17804544 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 8-175
Cow position: chr29:8163655-8163822 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 8-175
Cow position: chr29:22534135-22533968 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-175
Cow position: chr29:23142160-23142327 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 162, 152

Conread position: 8-176
Cow position: chr29:25432626-25432457 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 18

Conread position: 8-177
Cow position: chr29:17436919-17436756 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 8-177
Cow position: chr29:26017328-26017497 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 8-179
Cow position: chr29:9709865-9709698 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 8-179
Cow position: chr29:18449966-18450135 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 8-179
Cow position: chr29:29324248-29324417 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 114

Conread position: 8-179
Cow position: chr29:41422737-41422906 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 159, 0

Conread position: 8-179
Cow position: chr29:43088478-43088314 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 8-181
Cow position: chr29:16196027-16195843 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 165

Conread position: 8-181
Cow position: chr29:16290895-16290727 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 31

Conread position: 8-181
Cow position: chr29:21196480-21196648 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 32

Conread position: 8-181
Cow position: chr29:32799531-32799710 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 147

Conread position: 8-182
Cow position: chr29:3685349-3685519 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 71

Conread position: 8-182
Cow position: chr29:4070792-4070628 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 8-182
Cow position: chr29:5408970-5409141 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 8-182
Cow position: chr29:15796659-15796486 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 20

Conread position: 8-182
Cow position: chr29:15798126-15797952 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 20

Conread position: 8-182
Cow position: chr29:16272916-16272742 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-182
Cow position: chr29:16657863-16657699 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 8-182
Cow position: chr29:21645489-21645318 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 116

Conread position: 8-182
Cow position: chr29:23825040-23825210 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 8-182
Cow position: chr29:25737244-25737414 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 8-182
Cow position: chr29:31929158-31928989 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 8-182
Cow position: chr29:33321521-33321351 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 0

Conread position: 8-183
Cow position: chr29:5830845-5831021 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 8-183
Cow position: chr29:8634824-8634653 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 8-183
Cow position: chr29:14577029-14576858 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 8-183
Cow position: chr29:17222588-17222412 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 71, 26

Conread position: 8-183
Cow position: chr29:23874634-23874459 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 8-183
Cow position: chr29:31489496-31489318 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 8-183
Cow position: chr29:38754766-38754940 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 123, 47

Conread position: 8-183
Cow position: chr29:38858040-38858214 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 26

Conread position: 8-184
Cow position: chr29:396574-396411 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 8-184
Cow position: chr29:3293115-3292946 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 8-184
Cow position: chr29:4423278-4423441 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 8-184
Cow position: chr29:16279149-16278986 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 8-184
Cow position: chr29:19949477-19949308 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 8-184
Cow position: chr29:36781138-36781306 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 8-184
Cow position: chr29:37618480-37618303 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 148, 0

Conread position: 8-184
Cow position: chr29:41531023-41530848 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 84, 0

Conread position: 8-184
Cow position: chr29:44901489-44901668 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 54

Conread position: 8-188
Cow position: chr29:19061589-19061777 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 105

Conread position: 8-191
Cow position: chr29:4520504-4520331 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 8-191
Cow position: chr29:11915993-11915818 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 39

Conread position: 8-191
Cow position: chr29:12025304-12025476 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 8-191
Cow position: chr29:13028622-13028435 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 54, 156

Conread position: 8-191
Cow position: chr29:19910135-19909947 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 8-191
Cow position: chr29:22734933-22735114 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 29

Conread position: 8-191
Cow position: chr29:24365725-24365905 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 8-191
Cow position: chr29:34359654-34359829 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 8-196
Cow position: chr29:19125502-19125306 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 8-199
Cow position: chr29:26540368-26540557 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 47

Conread position: 8-202
Cow position: chr29:7954792-7954985 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 74

Conread position: 8-206
Cow position: chr29:34297399-34297592 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 9-159
Cow position: chr29:18748216-18748367 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 28

Conread position: 9-160
Cow position: chr29:27042447-27042293 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 9-173
Cow position: chr29:27911763-27911602 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 9-183
Cow position: chr29:3711547-3711378 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 9-183
Cow position: chr29:23637503-23637679 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 9-183
Cow position: chr29:29795209-29795383 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-184
Cow position: chr29:29057347-29057177 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 9-184
Cow position: chr29:31934547-31934377 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 9-191
Cow position: chr29:27926945-27926767 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 10-154
Cow position: chr29:29447554-29447409 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 121, 56

Conread position: 10-157
Cow position: chr29:11081224-11081371 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-160
Cow position: chr29:4484267-4484117 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 144, 49

Conread position: 10-166
Cow position: chr29:22128034-22127886 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 10-179
Cow position: chr29:34760231-34760410 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 155

Conread position: 10-180
Cow position: chr29:24293040-24292870 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 21

Conread position: 10-184
Cow position: chr29:23698142-23697975 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 138, 45

Conread position: 10-184
Cow position: chr29:38581162-38580978 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 146

Conread position: 10-212
Cow position: chr29:24605066-24604867 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 11-145
Cow position: chr29:7040699-7040835 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 11-145
Cow position: chr29:22019018-22019150 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 11-148
Cow position: chr29:2219556-2219421 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 11-155
Cow position: chr29:23991660-23991803 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 11-158
Cow position: chr29:34688741-34688882 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 11-161
Cow position: chr29:11894869-11894719 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 11-176
Cow position: chr29:29588756-29588920 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 11-176
Cow position: chr29:40117734-40117578 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 11-182
Cow position: chr29:20526993-20527163 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 11-182
Cow position: chr29:26411297-26411469 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 11-183
Cow position: chr29:86835-87012 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 88

Conread position: 11-183
Cow position: chr29:7955819-7955991 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 105

Conread position: 11-183
Cow position: chr29:16200307-16200479 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 11-183
Cow position: chr29:21706228-21706397 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 42

Conread position: 11-183
Cow position: chr29:22720478-22720652 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 44

Conread position: 11-183
Cow position: chr29:24187894-24188066 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 11-183
Cow position: chr29:29973844-29974015 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 166, 0

Conread position: 11-183
Cow position: chr29:30294702-30294866 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 11-183
Cow position: chr29:32733464-32733298 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 11-183
Cow position: chr29:35084054-35084223 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 11-183
Cow position: chr29:35458600-35458772 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 126

Conread position: 11-183
Cow position: chr29:38582139-38581972 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 149, 0

Conread position: 11-184
Cow position: chr29:31651571-31651409 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 52

Conread position: 11-184
Cow position: chr29:32655925-32656094 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 49

Conread position: 11-184
Cow position: chr29:35292255-35292090 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 134, 44

Conread position: 11-184
Cow position: chr29:42630286-42630119 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 11-191
Cow position: chr29:43544436-43544611 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 11-201
Cow position: chr29:40633822-40633625 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 190

Conread position: 12-135
Cow position: chr29:41094287-41094164 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-153
Cow position: chr29:7414665-7414530 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 15

Conread position: 12-174
Cow position: chr29:42865728-42865567 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 12-176
Cow position: chr29:19363876-19363717 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 12-176
Cow position: chr29:22723767-22723607 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 12-177
Cow position: chr29:501368-501202 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 15

Conread position: 12-177
Cow position: chr29:36632692-36632855 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 12-182
Cow position: chr29:5893017-5892845 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 12-182
Cow position: chr29:17110123-17109960 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 12-182
Cow position: chr29:19420449-19420613 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 12-182
Cow position: chr29:30227112-30227275 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 12-183
Cow position: chr29:5046824-5046652 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 12-183
Cow position: chr29:12900382-12900552 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 12-183
Cow position: chr29:18878311-18878482 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 142
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 12-183
Cow position: chr29:22068573-22068741 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 12-183
Cow position: chr29:36220711-36220533 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 12-183
Cow position: chr29:40994711-40994891 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 143

Conread position: 12-184
Cow position: chr29:5520316-5520487 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 12-184
Cow position: chr29:24051210-24051383 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 110

Conread position: 12-184
Cow position: chr29:30548944-30548774 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 12-184
Cow position: chr29:40583956-40583791 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 26

Conread position: 12-187
Cow position: chr29:26539399-26539230 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 12-191
Cow position: chr29:40097149-40096957 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 148

Conread position: 12-210
Cow position: chr29:4053176-4053369 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 180, 43

Conread position: 13-184
Cow position: chr29:4023163-4023002 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 14-157
Cow position: chr29:3826133-3825997 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 14-167
Cow position: chr29:3538519-3538661 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 14-168
Cow position: chr29:35737149-35737311 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 153

Conread position: 14-170
Cow position: chr29:33393854-33393690 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 14-175
Cow position: chr29:4648044-4648202 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 14-176
Cow position: chr29:22028795-22028946 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 14-178
Cow position: chr29:685011-685169 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 14-182
Cow position: chr29:9378801-9378637 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 14-182
Cow position: chr29:34358811-34358978 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 29

Conread position: 14-183
Cow position: chr29:21443170-21443339 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 14-184
Cow position: chr29:8669521-8669364 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 14-184
Cow position: chr29:28979347-28979500 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 15-156
Cow position: chr29:28279120-28279261 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 18-184
Cow position: chr29:2056219-2056059 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 19-149
Cow position: chr29:109841-109720 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 19-149
Cow position: chr29:13091307-13091434 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 19-182
Cow position: chr29:9310764-9310600 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 6, 128

Conread position: 19-183
Cow position: chr29:20167588-20167423 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 19-183
Cow position: chr29:23812883-23813040 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 32

Conread position: 19-184
Cow position: chr29:13639202-13639369 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 25

Conread position: 19-185
Cow position: chr29:4121017-4120851 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 19-191
Cow position: chr29:24624408-24624241 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 35

Conread position: 20-140
Cow position: chr29:18605499-18605618 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 20-149
Cow position: chr29:27487348-27487219 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-181
Cow position: chr29:19187186-19187027 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 20-183
Cow position: chr29:35259145-35258984 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 21-183
Cow position: chr29:34745498-34745658 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 25-156
Cow position: chr29:5653097-5652966 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 26-184
Cow position: chr29:629696-629536 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 27-155
Cow position: chr29:936356-936234 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 28-149
Cow position: chr29:17663604-17663728 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 29-179
Cow position: chr29:1325589-1325446 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 29-184
Cow position: chr29:13867057-13867212 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 5, 37

Conread position: 34-152
Cow position: chr29:45584342-45584226 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 45

Conread position: 34-183
Cow position: chr29:7966391-7966245 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 36-182
Cow position: chr29:40615343-40615493 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 121

Conread position: 37-177
Cow position: chr29:31814086-31813943 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 37-182
Cow position: chr29:42406838-42406693 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 39-183
Cow position: chr29:21509993-21509851 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 47-184
Cow position: chr29:7103693-7103556 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 48-168
Cow position: chr29:29940776-29940654 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 48-184
Cow position: chr29:16365751-16365891 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 48-191
Cow position: chr29:40298886-40299029 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 48-201
Cow position: chr29:6844498-6844650 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 133

Conread position: 48-204
Cow position: chr29:28559513-28559360 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 48-206
Cow position: chr29:1022429-1022273 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 49-182
Cow position: chr29:19059950-19060082 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 49-184
Cow position: chr29:1219998-1220133 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 49-184
Cow position: chr29:17409468-17409333 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 50-184
Cow position: chr29:2262863-2262994 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 51-161
Cow position: chr29:1402900-1402787 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 51-161
Cow position: chr29:28242212-28242320 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 51-184
Cow position: chr29:11647225-11647092 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 52-187
Cow position: chr29:32926235-32926099 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 55-163
Cow position: chr29:30424672-30424779 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 55-191
Cow position: chr29:22936398-22936263 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 103

Conread position: 56-182
Cow position: chr29:26653917-26654046 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 56-183
Cow position: chr29:16672613-16672490 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 56-193
Cow position: chr29:19176781-19176924 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 57-184
Cow position: chr29:6286036-6286163 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 64-184
Cow position: chr29:22519009-22519129 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 41

Conread position: 65-205
Cow position: chr29:25333344-25333481 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 66-184
Cow position: chr29:5789145-5789027 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 71

Conread position: 67-184
Cow position: chr29:4085423-4085311 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 68-182
Cow position: chr29:11053745-11053859 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 85

Conread position: 69-183
Cow position: chr29:13372776-13372663 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 71-164
Cow position: chr29:6015237-6015144 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 71-184
Cow position: chr29:27819329-27819217 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 74-184
Cow position: chr29:27873709-27873599 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 74-193
Cow position: chr29:1229715-1229596 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 80-184
Cow position: chr29:8686432-8686328 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 81-181
Cow position: chr29:39285596-39285496 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 83-196
Cow position: chr29:16947822-16947707 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.