Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Mixg-0001c04.3
        

               Conread position:
               1-154
               

               Cow position:
               chr5:21339054-21339213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               1-181
               

               Cow position:
               chr5:50578958-50579137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               1-183
               

               Cow position:
               chr5:66659720-66659536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               1-184
               

               Cow position:
               chr5:44163167-44163343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               157, 7
               

               Conread position:
               1-185
               

               Cow position:
               chr5:57687374-57687561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               122, 8
               

               Conread position:
               1-191
               

               Cow position:
               chr5:5016627-5016448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               2-182
               

               Cow position:
               chr5:66366714-66366538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               2-187
               

               Cow position:
               chr5:695070-694887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               3-147
               

               Cow position:
               chr5:26149240-26149097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               3-149
               

               Cow position:
               chr5:1678795-1678649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               70, 91
               

               Conread position:
               3-154
               

               Cow position:
               chr5:19052586-19052736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               3-155
               

               Cow position:
               chr5:55162833-55162681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-155
               

               Cow position:
               chr5:69682142-69682294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-158
               

               Cow position:
               chr5:63763870-63763716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               153, 69
               

               Conread position:
               3-168
               

               Cow position:
               chr5:32064773-32064938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 69
               

               Conread position:
               3-174
               

               Cow position:
               chr5:64492481-64492310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-175
               

               Cow position:
               chr5:54751013-54750842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               3-176
               

               Cow position:
               chr5:21525366-21525194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               106, 84
               

               Conread position:
               3-176
               

               Cow position:
               chr5:64026810-64026985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-178
               

               Cow position:
               chr5:12300115-12299943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               3-178
               

               Cow position:
               chr5:26894508-26894687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-178
               

               Cow position:
               chr5:40122403-40122578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-178
               

               Cow position:
               chr5:62572736-62572564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-178
               

               Cow position:
               chr5:73424472-73424649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               28, 159
               

               Conread position:
               3-179
               

               Cow position:
               chr5:53795226-53795056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               132, 44
               

               Conread position:
               3-181
               

               Cow position:
               chr5:38853556-38853378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-182
               

               Cow position:
               chr5:5202108-5201929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-182
               

               Cow position:
               chr5:18513501-18513678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               3-182
               

               Cow position:
               chr5:18702016-18702192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               3-182
               

               Cow position:
               chr5:37679378-37679200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               3-182
               

               Cow position:
               chr5:57279591-57279412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:58725-58905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               59, 127
               

               Conread position:
               3-183
               

               Cow position:
               chr5:1005661-1005841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:7177357-7177178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:30035274-30035094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:32935950-32935772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:37713447-37713627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:40889090-40889270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:41935450-41935624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               124, 111
               

               Conread position:
               3-183
               

               Cow position:
               chr5:44196725-44196902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:57393098-57393277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr5:60209941-60210116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               3-183
               

               Cow position:
               chr5:60514821-60515001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               78, 123
               

               Conread position:
               3-183
               

               Cow position:
               chr5:63241184-63241004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-184
               

               Cow position:
               chr5:3677933-3677749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               72, 156
               

               Conread position:
               3-184
               

               Cow position:
               chr5:65679767-65679944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               3-187
               

               Cow position:
               chr5:6503671-6503858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-187
               

               Cow position:
               chr5:37255128-37255312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-187
               

               Cow position:
               chr5:51920495-51920311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-187
               

               Cow position:
               chr5:61576752-61576568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-189
               

               Cow position:
               chr5:43839792-43839977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               173, 150
               

               Conread position:
               3-191
               

               Cow position:
               chr5:1104672-1104860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-201
               

               Cow position:
               chr5:23209164-23208966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-168
               

               Cow position:
               chr5:1027271-1027425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               4-170
               

               Cow position:
               chr5:56434087-56433921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 68
               

               Conread position:
               4-180
               

               Cow position:
               chr5:453755-453587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               5-149
               

               Cow position:
               chr5:16637647-16637798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               5-150
               

               Cow position:
               chr5:48819479-48819333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 118
               

               Conread position:
               5-175
               

               Cow position:
               chr5:12562557-12562725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               126, 50
               

               Conread position:
               5-180
               

               Cow position:
               chr5:6695752-6695575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 98
               

               Conread position:
               5-183
               

               Cow position:
               chr5:52164970-52165150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               43, 103
               

               Conread position:
               5-204
               

               Cow position:
               chr5:3743529-3743329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 192
               

               Conread position:
               5-210
               

               Cow position:
               chr5:26167623-26167420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               179, 50
               

               Conread position:
               7-153
               

               Cow position:
               chr5:12668791-12668927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               7-161
               

               Cow position:
               chr5:65745567-65745716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               7-179
               

               Cow position:
               chr5:3772043-3771879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               7-180
               

               Cow position:
               chr5:49920127-49919954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-183
               

               Cow position:
               chr5:64140739-64140564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               150, 57
               

               Conread position:
               7-183
               

               Cow position:
               chr5:66582171-66581988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               61, 91
               

               Conread position:
               7-183
               

               Cow position:
               chr5:68605064-68604880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 154
               

               Conread position:
               7-184
               

               Cow position:
               chr5:17383953-17384123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               7-207
               

               Cow position:
               chr5:71015684-71015883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               159, 38
               

               Conread position:
               8-124
               

               Cow position:
               chr5:75711937-75712052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               8-126
               

               Cow position:
               chr5:44868555-44868441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               8-130
               

               Cow position:
               chr5:14419817-14419930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               8-130
               

               Cow position:
               chr5:45854701-45854577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               8-131
               

               Cow position:
               chr5:31317201-31317079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               8-131
               

               Cow position:
               chr5:58487573-58487454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-136
               

               Cow position:
               chr5:56624314-56624443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               8-137
               

               Cow position:
               chr5:29060739-29060862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               8-140
               

               Cow position:
               chr5:69765834-69765964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-141
               

               Cow position:
               chr5:24108858-24108991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-142
               

               Cow position:
               chr5:55783761-55783895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-145
               

               Cow position:
               chr5:54712868-54713000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               8-145
               

               Cow position:
               chr5:56643268-56643132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               8-148
               

               Cow position:
               chr5:718349-718212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-148
               

               Cow position:
               chr5:4981648-4981512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               8-148
               

               Cow position:
               chr5:25035054-25035196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               8-148
               

               Cow position:
               chr5:40292737-40292877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-148
               

               Cow position:
               chr5:57447464-57447604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-150
               

               Cow position:
               chr5:59662857-59662998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               8-154
               

               Cow position:
               chr5:18289318-18289178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr5:29599352-29599491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr5:37253623-37253484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr5:47602008-47601867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr5:56734484-56734343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr5:60100662-60100525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr5:60207905-60207763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr5:74887699-74887845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 47
               

               Conread position:
               8-156
               

               Cow position:
               chr5:30492591-30492740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 71
               

               Conread position:
               8-157
               

               Cow position:
               chr5:41530736-41530887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               8-161
               

               Cow position:
               chr5:17987693-17987844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               8-161
               

               Cow position:
               chr5:20345738-20345587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 92
               

               Conread position:
               8-161
               

               Cow position:
               chr5:34787772-34787623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               8-161
               

               Cow position:
               chr5:50525720-50525573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 47
               

               Conread position:
               8-161
               

               Cow position:
               chr5:65140500-65140345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               132, 85
               

               Conread position:
               8-163
               

               Cow position:
               chr5:58401765-58401616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-164
               

               Cow position:
               chr5:19294319-19294480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               43, 86
               

               Conread position:
               8-164
               

               Cow position:
               chr5:51012200-51012045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               99, 83
               

               Conread position:
               8-167
               

               Cow position:
               chr5:20288058-20288218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               81, 152
               

               Conread position:
               8-167
               

               Cow position:
               chr5:59335973-59335813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               8-168
               

               Cow position:
               chr5:7139641-7139789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               8-168
               

               Cow position:
               chr5:17062879-17063037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               8-168
               

               Cow position:
               chr5:53779355-53779195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               148, 47
               

               Conread position:
               8-170
               

               Cow position:
               chr5:28881482-28881652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               8-170
               

               Cow position:
               chr5:60523927-60523772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               140, 45
               

               Conread position:
               8-172
               

               Cow position:
               chr5:24996021-24996184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               8-173
               

               Cow position:
               chr5:48061910-48062077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               8-175
               

               Cow position:
               chr5:57755834-57755997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               8-176
               

               Cow position:
               chr5:62996159-62995991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-177
               

               Cow position:
               chr5:67932266-67932439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               8-178
               

               Cow position:
               chr5:20127108-20126935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               128, 56
               

               Conread position:
               8-179
               

               Cow position:
               chr5:2240789-2240958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               8-179
               

               Cow position:
               chr5:19752501-19752338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               8-179
               

               Cow position:
               chr5:30253940-30253772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               8-179
               

               Cow position:
               chr5:30628953-30629128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               8-179
               

               Cow position:
               chr5:46704100-46704268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 55
               

               Conread position:
               8-179
               

               Cow position:
               chr5:53980552-53980723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-179
               

               Cow position:
               chr5:55942177-55942348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-179
               

               Cow position:
               chr5:57156100-57156281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               8-179
               

               Cow position:
               chr5:57767785-57767954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               8-179
               

               Cow position:
               chr5:59384486-59384658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               8-180
               

               Cow position:
               chr5:42753096-42752938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               8-180
               

               Cow position:
               chr5:51125818-51125979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               8-180
               

               Cow position:
               chr5:52108058-52108238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 109
               

               Conread position:
               8-180
               

               Cow position:
               chr5:64843765-64843941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               8-181
               

               Cow position:
               chr5:12902119-12901946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-181
               

               Cow position:
               chr5:29828248-29828077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               39, 69
               

               Conread position:
               8-181
               

               Cow position:
               chr5:36143178-36143016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               8-181
               

               Cow position:
               chr5:65760334-65760503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               8-182
               

               Cow position:
               chr5:6443943-6444125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               48, 137
               

               Conread position:
               8-182
               

               Cow position:
               chr5:16668893-16668725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:30247325-30247494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:34288054-34288222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               8-182
               

               Cow position:
               chr5:39035982-39035808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               8-182
               

               Cow position:
               chr5:39447325-39447507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:41165282-41165116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:45397767-45397601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:47220692-47220516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               8-182
               

               Cow position:
               chr5:49821631-49821456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:52138138-52137963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               8-182
               

               Cow position:
               chr5:54875493-54875671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               133, 75
               

               Conread position:
               8-182
               

               Cow position:
               chr5:57399051-57399224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:57744710-57744896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               8-182
               

               Cow position:
               chr5:59626772-59626943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:64175930-64176098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-182
               

               Cow position:
               chr5:69383451-69383283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:7057197-7057374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 125
               

               Conread position:
               8-183
               

               Cow position:
               chr5:12873952-12873778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               8-183
               

               Cow position:
               chr5:14550382-14550557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:17828277-17828452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:20128254-20128079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:20843198-20843368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               8-183
               

               Cow position:
               chr5:31475884-31475709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:33560538-33560707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:33834240-33834069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:34347533-34347701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:35145535-35145354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 117
               

               Conread position:
               8-183
               

               Cow position:
               chr5:35513421-35513242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:36868937-36868764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:43604339-43604168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:44734527-44734698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:47316772-47316947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               8-183
               

               Cow position:
               chr5:47756972-47756803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:48867270-48867437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:50723248-50723073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:56059864-56060043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:57419596-57419767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:61049534-61049359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:61914771-61914590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:61999356-61999530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:64060646-64060473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-183
               

               Cow position:
               chr5:65776177-65776358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               8-183
               

               Cow position:
               chr5:65883424-65883599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:2469010-2469181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:4267860-4267696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:16937834-16937996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:18062110-18062293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:18574382-18574201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 132
               

               Conread position:
               8-184
               

               Cow position:
               chr5:24464938-24464770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               150, 26
               

               Conread position:
               8-184
               

               Cow position:
               chr5:26262485-26262648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 42
               

               Conread position:
               8-184
               

               Cow position:
               chr5:33273897-33273721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 144
               

               Conread position:
               8-184
               

               Cow position:
               chr5:35969740-35969559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 169
               

               Conread position:
               8-184
               

               Cow position:
               chr5:39937317-39937142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:42064407-42064231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:43403109-43402931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               8-184
               

               Cow position:
               chr5:43858218-43858393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:46022858-46023039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               8-184
               

               Cow position:
               chr5:53947099-53946923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:55965692-55965868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:57101326-57101496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:59241776-59241952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-184
               

               Cow position:
               chr5:64523664-64523837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               8-185
               

               Cow position:
               chr5:7012649-7012822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               8-185
               

               Cow position:
               chr5:52853167-52852996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-187
               

               Cow position:
               chr5:57265702-57265881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-187
               

               Cow position:
               chr5:66972630-66972452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               8-187
               

               Cow position:
               chr5:69427261-69427428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               8-190
               

               Cow position:
               chr5:44722313-44722492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               8-190
               

               Cow position:
               chr5:60741445-60741265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               166, 68
               

               Conread position:
               8-191
               

               Cow position:
               chr5:5257087-5257269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               39, 49
               

               Conread position:
               8-191
               

               Cow position:
               chr5:11667984-11668166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               8-191
               

               Cow position:
               chr5:25598029-25597852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-191
               

               Cow position:
               chr5:45225620-45225794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-191
               

               Cow position:
               chr5:55956110-55955927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 47
               

               Conread position:
               8-191
               

               Cow position:
               chr5:56860643-56860466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               8-191
               

               Cow position:
               chr5:57062328-57062510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               8-191
               

               Cow position:
               chr5:59395864-59395681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               172, 165
               

               Conread position:
               8-192
               

               Cow position:
               chr5:20779199-20779377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-192
               

               Cow position:
               chr5:57526727-57526907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               182, 105
               

               Conread position:
               8-193
               

               Cow position:
               chr5:50942962-50943140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               8-201
               

               Cow position:
               chr5:16214881-16214697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               8-202
               

               Cow position:
               chr5:38820459-38820651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               8-204
               

               Cow position:
               chr5:36823072-36822891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               178, 30
               

               Conread position:
               8-213
               

               Cow position:
               chr5:26147790-26147587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               176, 60
               

               Conread position:
               8-239
               

               Cow position:
               chr5:47743821-47743595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               186, 41
               

               Conread position:
               9-149
               

               Cow position:
               chr5:55749837-55749976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               9-170
               

               Cow position:
               chr5:44028106-44028266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               9-181
               

               Cow position:
               chr5:19079442-19079281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               9-181
               

               Cow position:
               chr5:54127486-54127318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               165, 46
               

               Conread position:
               9-182
               

               Cow position:
               chr5:22565818-22565647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               9-183
               

               Cow position:
               chr5:5751408-5751582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-184
               

               Cow position:
               chr5:2827577-2827400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               9-184
               

               Cow position:
               chr5:15471120-15470959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               9-184
               

               Cow position:
               chr5:50101179-50101350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               133, 46
               

               Conread position:
               9-201
               

               Cow position:
               chr5:35459097-35459285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               125, 45
               

               Conread position:
               10-160
               

               Cow position:
               chr5:12557089-12557238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               145, 45
               

               Conread position:
               10-182
               

               Cow position:
               chr5:30845304-30845141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               10-182
               

               Cow position:
               chr5:62341231-62341056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               10-183
               

               Cow position:
               chr5:32975360-32975526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               10-184
               

               Cow position:
               chr5:20882415-20882598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               10-184
               

               Cow position:
               chr5:29352934-29353099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               10-184
               

               Cow position:
               chr5:35228944-35229112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               10-185
               

               Cow position:
               chr5:55756215-55756395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               11-131
               

               Cow position:
               chr5:52778367-52778487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-144
               

               Cow position:
               chr5:14168043-14167908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 122
               

               Conread position:
               11-147
               

               Cow position:
               chr5:22667267-22667134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               11-148
               

               Cow position:
               chr5:61456040-61455906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               11-150
               

               Cow position:
               chr5:35235490-35235629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-152
               

               Cow position:
               chr5:15770255-15770397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               44, 131
               

               Conread position:
               11-154
               

               Cow position:
               chr5:43846181-43846329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               11-156
               

               Cow position:
               chr5:63939861-63940007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               11-170
               

               Cow position:
               chr5:6876768-6876928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               107, 57
               

               Conread position:
               11-170
               

               Cow position:
               chr5:11229474-11229635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               11-171
               

               Cow position:
               chr5:45405243-45405083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-175
               

               Cow position:
               chr5:7675961-7676120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               11-175
               

               Cow position:
               chr5:71445589-71445425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-176
               

               Cow position:
               chr5:25495153-25495324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               11-178
               

               Cow position:
               chr5:19335580-19335749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-178
               

               Cow position:
               chr5:65050022-65050177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               11-179
               

               Cow position:
               chr5:4347496-4347673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               11-179
               

               Cow position:
               chr5:9486886-9487051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               11-179
               

               Cow position:
               chr5:37842082-37842248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               11-179
               

               Cow position:
               chr5:41983921-41983755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               71, 147
               

               Conread position:
               11-179
               

               Cow position:
               chr5:53935357-53935518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               11-179
               

               Cow position:
               chr5:72045478-72045643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               11-180
               

               Cow position:
               chr5:8736080-8736249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               11-182
               

               Cow position:
               chr5:7044509-7044677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               11-182
               

               Cow position:
               chr5:11539855-11540022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 100
               

               Conread position:
               11-182
               

               Cow position:
               chr5:26548946-26549112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               11-182
               

               Cow position:
               chr5:30233107-30232936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 98
               

               Conread position:
               11-182
               

               Cow position:
               chr5:55795773-55795939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               134, 43
               

               Conread position:
               11-182
               

               Cow position:
               chr5:57686544-57686709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               11-182
               

               Cow position:
               chr5:65941053-65941222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               11-183
               

               Cow position:
               chr5:5760112-5760286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 110
               

               Conread position:
               11-183
               

               Cow position:
               chr5:11562530-11562696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               145, 43
               

               Conread position:
               11-183
               

               Cow position:
               chr5:15364468-15364296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               11-183
               

               Cow position:
               chr5:32394799-32394626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               11-183
               

               Cow position:
               chr5:35208460-35208291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               11-183
               

               Cow position:
               chr5:44796539-44796706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               11-183
               

               Cow position:
               chr5:54350174-54350334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               11-183
               

               Cow position:
               chr5:63172851-63173016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               11-183
               

               Cow position:
               chr5:65343825-65343650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               11-184
               

               Cow position:
               chr5:5856057-5855884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-184
               

               Cow position:
               chr5:14903869-14904043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               11-184
               

               Cow position:
               chr5:35246911-35247086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               146
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               11-184
               

               Cow position:
               chr5:53055362-53055535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-184
               

               Cow position:
               chr5:70189275-70189100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               11-185
               

               Cow position:
               chr5:17105042-17104878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               11-190
               

               Cow position:
               chr5:41885111-41884942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               11-191
               

               Cow position:
               chr5:2309361-2309537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               11-191
               

               Cow position:
               chr5:44810040-44810220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-211
               

               Cow position:
               chr5:38040371-38040567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               175, 44
               

               Conread position:
               12-104
               

               Cow position:
               chr5:74690056-74690148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-130
               

               Cow position:
               chr5:28660427-28660310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               12-138
               

               Cow position:
               chr5:54554989-54555118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               12-140
               

               Cow position:
               chr5:32975962-32975828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               12-145
               

               Cow position:
               chr5:55949482-55949614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               12-148
               

               Cow position:
               chr5:73253601-73253470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               12-154
               

               Cow position:
               chr5:21721276-21721414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               12-155
               

               Cow position:
               chr5:57556228-57556084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               12-156
               

               Cow position:
               chr5:70346505-70346355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               12-170
               

               Cow position:
               chr5:63234627-63234787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 69
               

               Conread position:
               12-172
               

               Cow position:
               chr5:30221581-30221740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               12-172
               

               Cow position:
               chr5:43611896-43611736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-176
               

               Cow position:
               chr5:44901716-44901543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               12-177
               

               Cow position:
               chr5:51233827-51233986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               12-178
               

               Cow position:
               chr5:742927-742763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               12-178
               

               Cow position:
               chr5:56548762-56548604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               12-179
               

               Cow position:
               chr5:38169089-38168925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               12-179
               

               Cow position:
               chr5:62011881-62011714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-179
               

               Cow position:
               chr5:69461531-69461364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 56
               

               Conread position:
               12-181
               

               Cow position:
               chr5:29256512-29256678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               12-181
               

               Cow position:
               chr5:50087965-50087800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 138
               

               Conread position:
               12-182
               

               Cow position:
               chr5:21829063-21828896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               12-182
               

               Cow position:
               chr5:49474358-49474517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               12-182
               

               Cow position:
               chr5:54753053-54753224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               12-183
               

               Cow position:
               chr5:1987812-1987642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               12-183
               

               Cow position:
               chr5:11427037-11427206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 72
               

               Conread position:
               12-183
               

               Cow position:
               chr5:12760924-12761091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               12-183
               

               Cow position:
               chr5:29681291-29681125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               12-183
               

               Cow position:
               chr5:34976643-34976815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               12-183
               

               Cow position:
               chr5:58519218-58519389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-184
               

               Cow position:
               chr5:6520202-6520037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               12-184
               

               Cow position:
               chr5:60948328-60948159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 56
               

               Conread position:
               12-184
               

               Cow position:
               chr5:67634312-67634491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               12-185
               

               Cow position:
               chr5:30562124-30561957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               12-191
               

               Cow position:
               chr5:17999300-17999473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               12-202
               

               Cow position:
               chr5:44799002-44798813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               184, 171
               

               Conread position:
               12-207
               

               Cow position:
               chr5:54340964-54340775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               12-214
               

               Cow position:
               chr5:5666624-5666822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               188, 145
               

               Conread position:
               12-250
               

               Cow position:
               chr5:19561250-19561495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               144, 162
               

               Conread position:
               13-144
               

               Cow position:
               chr5:75116375-75116507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               13-179
               

               Cow position:
               chr5:35190301-35190141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               13-182
               

               Cow position:
               chr5:54312796-54312629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               13-182
               

               Cow position:
               chr5:57074137-57074303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               13-183
               

               Cow position:
               chr5:61007262-61007092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               13-183
               

               Cow position:
               chr5:73167819-73167984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               13-184
               

               Cow position:
               chr5:49501623-49501798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               13-184
               

               Cow position:
               chr5:61784530-61784701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-187
               

               Cow position:
               chr5:26097485-26097313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               13-191
               

               Cow position:
               chr5:15479329-15479145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               14-133
               

               Cow position:
               chr5:35320368-35320482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               14-167
               

               Cow position:
               chr5:56327529-56327678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 41
               

               Conread position:
               14-171
               

               Cow position:
               chr5:31527198-31527357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               14-172
               

               Cow position:
               chr5:31648609-31648460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               14-179
               

               Cow position:
               chr5:22608835-22608673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               14-181
               

               Cow position:
               chr5:4280638-4280477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               141
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               14-182
               

               Cow position:
               chr5:30276880-30276718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               14-182
               

               Cow position:
               chr5:56613369-56613536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               14-183
               

               Cow position:
               chr5:1247459-1247293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               14-183
               

               Cow position:
               chr5:13270821-13270990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               69, 137
               

               Conread position:
               14-183
               

               Cow position:
               chr5:22102752-22102585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               14-183
               

               Cow position:
               chr5:46063690-46063524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               14-183
               

               Cow position:
               chr5:61580476-61580309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 57
               

               Conread position:
               14-184
               

               Cow position:
               chr5:65552525-65552685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-181
               

               Cow position:
               chr5:16939399-16939565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-141
               

               Cow position:
               chr5:57994687-57994809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               18-157
               

               Cow position:
               chr5:23855483-23855616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               18-166
               

               Cow position:
               chr5:57086872-57087019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               18-168
               

               Cow position:
               chr5:38079565-38079409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               18-181
               

               Cow position:
               chr5:24915335-24915498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-181
               

               Cow position:
               chr5:70749996-70750156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               18-182
               

               Cow position:
               chr5:34914865-34915025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               18-183
               

               Cow position:
               chr5:20812739-20812573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               18-183
               

               Cow position:
               chr5:61492288-61492120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               19-135
               

               Cow position:
               chr5:29507400-29507514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               19-149
               

               Cow position:
               chr5:29010445-29010317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               19-154
               

               Cow position:
               chr5:9352699-9352566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               19-156
               

               Cow position:
               chr5:49358490-49358624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               19-170
               

               Cow position:
               chr5:2355711-2355560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               19-173
               

               Cow position:
               chr5:19298480-19298642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               19-181
               

               Cow position:
               chr5:21003497-21003345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               19-182
               

               Cow position:
               chr5:33482905-33482749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               143, 36
               

               Conread position:
               19-184
               

               Cow position:
               chr5:17566245-17566412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               45, 157
               

               Conread position:
               19-185
               

               Cow position:
               chr5:20994896-20995067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               140, 13
               

               Conread position:
               19-185
               

               Cow position:
               chr5:42845404-42845568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               94, 36
               

               Conread position:
               19-185
               

               Cow position:
               chr5:71579650-71579488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               19-191
               

               Cow position:
               chr5:11769461-11769290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               19-215
               

               Cow position:
               chr5:72167309-72167503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 167
               

               Conread position:
               20-147
               

               Cow position:
               chr5:15077446-15077571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               20-147
               

               Cow position:
               chr5:52192245-52192366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               20-155
               

               Cow position:
               chr5:34918531-34918401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               20-155
               

               Cow position:
               chr5:49207141-49207272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               20-161
               

               Cow position:
               chr5:46749637-46749777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               20-167
               

               Cow position:
               chr5:30497685-30497540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               20-181
               

               Cow position:
               chr5:52723763-52723605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               20-183
               

               Cow position:
               chr5:30419165-30419002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-183
               

               Cow position:
               chr5:52001433-52001596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-184
               

               Cow position:
               chr5:51053460-51053627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               138, 44
               

               Conread position:
               20-184
               

               Cow position:
               chr5:71495010-71494847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               20-185
               

               Cow position:
               chr5:16185568-16185403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-191
               

               Cow position:
               chr5:46681530-46681698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               21-149
               

               Cow position:
               chr5:45436309-45436435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               21-184
               

               Cow position:
               chr5:30805345-30805191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               21-184
               

               Cow position:
               chr5:37646353-37646517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               21-205
               

               Cow position:
               chr5:26370873-26370688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               25-171
               

               Cow position:
               chr5:41522501-41522639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               25-177
               

               Cow position:
               chr5:36370463-36370312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               26-161
               

               Cow position:
               chr5:29979782-29979909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               27-186
               

               Cow position:
               chr5:17602024-17602180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               27-214
               

               Cow position:
               chr5:60126877-60126688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               43, 134
               

               Conread position:
               29-181
               

               Cow position:
               chr5:14473220-14473375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               29-183
               

               Cow position:
               chr5:11289209-11289366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               29-184
               

               Cow position:
               chr5:3589208-3589057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               31-146
               

               Cow position:
               chr5:73914529-73914414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-203
               

               Cow position:
               chr5:54404676-54404845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               35-181
               

               Cow position:
               chr5:26497507-26497648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               35-182
               

               Cow position:
               chr5:30949740-30949887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-183
               

               Cow position:
               chr5:26093991-26094139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-182
               

               Cow position:
               chr5:7723834-7723693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               41-178
               

               Cow position:
               chr5:4956443-4956580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               47-164
               

               Cow position:
               chr5:61875698-61875583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               47-179
               

               Cow position:
               chr5:60715205-60715335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               47-184
               

               Cow position:
               chr5:28230329-28230188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               47-184
               

               Cow position:
               chr5:55019458-55019318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               48-149
               

               Cow position:
               chr5:54154041-54154141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               48-168
               

               Cow position:
               chr5:54067875-54068000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               48-183
               

               Cow position:
               chr5:53855868-53855727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               48-183
               

               Cow position:
               chr5:63426844-63426978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               48-184
               

               Cow position:
               chr5:12738396-12738529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               48-184
               

               Cow position:
               chr5:43992486-43992350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               48-184
               

               Cow position:
               chr5:45419975-45420111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               48-184
               

               Cow position:
               chr5:54060438-54060304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               48-184
               

               Cow position:
               chr5:55129505-55129369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               48-184
               

               Cow position:
               chr5:58446972-58446833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               48-191
               

               Cow position:
               chr5:23678541-23678680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               48-191
               

               Cow position:
               chr5:60908826-60908685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               48-201
               

               Cow position:
               chr5:26476856-26477007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               49-164
               

               Cow position:
               chr5:23866319-23866434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               49-183
               

               Cow position:
               chr5:59872921-59873053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               49-190
               

               Cow position:
               chr5:17724056-17724196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               51-148
               

               Cow position:
               chr5:63059220-63059123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               51-178
               

               Cow position:
               chr5:4709993-4710119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               51-183
               

               Cow position:
               chr5:54436914-54436783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 102
               

               Conread position:
               51-184
               

               Cow position:
               chr5:59627259-59627126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               51-191
               

               Cow position:
               chr5:74858734-74858594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               108, 104
               

               Conread position:
               52-164
               

               Cow position:
               chr5:18091163-18091050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               52-183
               

               Cow position:
               chr5:24946402-24946267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               53-184
               

               Cow position:
               chr5:58555296-58555163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               55-181
               

               Cow position:
               chr5:29771683-29771557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               55-184
               

               Cow position:
               chr5:458643-458515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               55-184
               

               Cow position:
               chr5:26723601-26723474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               55-198
               

               Cow position:
               chr5:56361950-56361808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               55-201
               

               Cow position:
               chr5:54311491-54311346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               56-180
               

               Cow position:
               chr5:57230183-57230308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               56-183
               

               Cow position:
               chr5:38739249-38739376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-183
               

               Cow position:
               chr5:58856258-58856130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 85
               

               Conread position:
               56-184
               

               Cow position:
               chr5:9369119-9369245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               56-201
               

               Cow position:
               chr5:64758615-64758757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               56-203
               

               Cow position:
               chr5:51490448-51490595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               57-166
               

               Cow position:
               chr5:36251265-36251156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               57-183
               

               Cow position:
               chr5:38382647-38382772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               57-184
               

               Cow position:
               chr5:45037402-45037276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               57-184
               

               Cow position:
               chr5:50575936-50575810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               57-187
               

               Cow position:
               chr5:27293731-27293861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               58-183
               

               Cow position:
               chr5:45273350-45273474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               58-184
               

               Cow position:
               chr5:41294233-41294107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               58-184
               

               Cow position:
               chr5:51277702-51277827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               59-183
               

               Cow position:
               chr5:37808512-37808636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-191
               

               Cow position:
               chr5:35126206-35126074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-179
               

               Cow position:
               chr5:54086684-54086571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               64-180
               

               Cow position:
               chr5:36839105-36838990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               64-184
               

               Cow position:
               chr5:39258652-39258534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               64-184
               

               Cow position:
               chr5:42623034-42623153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               64-184
               

               Cow position:
               chr5:54375356-54375476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-184
               

               Cow position:
               chr5:54767763-54767883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-184
               

               Cow position:
               chr5:63987299-63987419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 80
               

               Conread position:
               64-199
               

               Cow position:
               chr5:35725752-35725892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               65-179
               

               Cow position:
               chr5:4336437-4336328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               65-179
               

               Cow position:
               chr5:70353838-70353953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               65-184
               

               Cow position:
               chr5:47323607-47323489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               65-184
               

               Cow position:
               chr5:57150812-57150691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               66-183
               

               Cow position:
               chr5:56287358-56287475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               66-184
               

               Cow position:
               chr5:28224596-28224479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               67-168
               

               Cow position:
               chr5:17644485-17644586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-182
               

               Cow position:
               chr5:30638435-30638551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               67-183
               

               Cow position:
               chr5:41981511-41981399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               68-183
               

               Cow position:
               chr5:63656621-63656503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               69-183
               

               Cow position:
               chr5:53710548-53710662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-191
               

               Cow position:
               chr5:34463439-34463559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               69-216
               

               Cow position:
               chr5:70728768-70728623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               70-169
               

               Cow position:
               chr5:38418656-38418558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               71-203
               

               Cow position:
               chr5:2851729-2851603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               74-182
               

               Cow position:
               chr5:6528821-6528711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-154
Cow position:	chr5:21339054-21339213 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	125
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	47, 7
Conread position:	1-181
Cow position:	chr5:50578958-50579137 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	130
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	91, 7
Conread position:	1-183
Cow position:	chr5:66659720-66659536 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	132
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	67, 7
Conread position:	1-184
Cow position:	chr5:44163167-44163343 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	140
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	157, 7
Conread position:	1-185
Cow position:	chr5:57687374-57687561 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	139
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	122, 8
Conread position:	1-191
Cow position:	chr5:5016627-5016448 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	149
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	7, 0
Conread position:	2-182
Cow position:	chr5:66366714-66366538 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	127
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	7, 0
Conread position:	2-187
Cow position:	chr5:695070-694887 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	140
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	18, 26
Conread position:	3-147
Cow position:	chr5:26149240-26149097 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	115
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	42, 0
Conread position:	3-149
Cow position:	chr5:1678795-1678649 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	108
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	70, 91
Conread position:	3-154
Cow position:	chr5:19052586-19052736 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	121
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	47, 0
Conread position:	3-155
Cow position:	chr5:55162833-55162681 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	112
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	0, 0
Conread position:	3-158
Cow position:	chr5:63763870-63763716 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	119
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	153, 69
Conread position:	3-168
Cow position:	chr5:32064773-32064938 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	125
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	82, 69
Conread position:	3-174
Cow position:	chr5:64492481-64492310 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	118
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	3-175
Cow position:	chr5:54751013-54750842 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	137
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	56, 0
Conread position:	3-176
Cow position:	chr5:21525366-21525194 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	124
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	106, 84
Conread position:	3-178
Cow position:	chr5:12300115-12299943 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	140
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	74, 32
Conread position:	3-179
Cow position:	chr5:53795226-53795056 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	130
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	132, 44
Conread position:	3-181
Cow position:	chr5:38853556-38853378 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	123
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	0, 0