Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 135-562 |
| Cow position: | chr13:22124934-22125358 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 125, 151 |
| Conread position: | 135-562 |
| Cow position: | chr13:24162660-24163084 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 125, 149 |
| Conread position: | 135-635 |
| Cow position: | chr13:22125354-22125851 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 125 |
| Conread position: | 135-635 |
| Cow position: | chr13:24163080-24163577 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 125 |
| Conread position: | 135-639 |
| Cow position: | chr13:24162996-24163495 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 456, 125 |
| Conread position: | 135-655 |
| Cow position: | chr13:22125270-22125784 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 456, 125 |
| Conread position: | 143-641 |
| Cow position: | chr13:22124858-22125353 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 102, 108 |
| Conread position: | 143-641 |
| Cow position: | chr13:22125024-22125521 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 152 |
| Conread position: | 143-641 |
| Cow position: | chr13:24162584-24163079 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 102, 108 |
| Conread position: | 143-641 |
| Cow position: | chr13:24162836-24163331 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 150-563 |
| Cow position: | chr13:22125201-22125611 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 150-563 |
| Cow position: | chr13:24162927-24163337 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 150-641 |
| Cow position: | chr13:39930668-39931154 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 257-641 |
| Cow position: | chr13:39930689-39931072 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 273-641 |
| Cow position: | chr13:39930623-39930988 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 301-641 |
| Cow position: | chr13:22124761-22125101 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 290, 300 |
| Conread position: | 301-641 |
| Cow position: | chr13:22124845-22125185 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 301-641 |
| Cow position: | chr13:24162487-24162827 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 290, 300 |
| Conread position: | 301-641 |
| Cow position: | chr13:24162571-24162911 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 224, 217 |
| Conread position: | 323-641 |
| Cow position: | chr13:24162425-24162743 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 101, 111 |
Show alignments to all cow chromosomes.