Cow genome map


           Conread name:
           Ss1.1-Mixn-0004k05.5
        

               Conread position:
               127-477
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               151, 11
               

               Conread position:
               131-641
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               134, 8
               

               Conread position:
               134-640
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               144, 6
               

               Conread position:
               134-641
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               311
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               186, 6
               

               Conread position:
               135-568
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               135-569
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               273
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               135, 121
               

               Conread position:
               135-580
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               189, 159
               

               Conread position:
               135-580
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               135-590
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               143, 128
               

               Conread position:
               135-639
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               185, 161
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 135
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               303
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               79, 73
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 80
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 161
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               216, 128
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 158
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               327
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               319
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               143, 128
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 79
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               304
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               43, 47
               

               Conread position:
               136-638
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               142, 127
               

               Conread position:
               138-539
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               139-641
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               139, 131
               

               Conread position:
               141-547
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               149-586
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               341, 144
               

               Conread position:
               149-635
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               446, 121
               

               Conread position:
               150-642
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               309
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               106, 127
               

               Conread position:
               238-640
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               200, 58
               

               Conread position:
               269-641
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               277-568
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               277-641
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               287-641
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               148, 16
               

               Conread position:
               295-641
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 51
               

               Conread position:
               297-569
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               140, 6
               

               Conread position:
               297-590
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               297-634
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               140, 6
               

               Conread position:
               297-639
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               309, 285
               

               Conread position:
               297-640
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               138, 11
               

               Conread position:
               297-641
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               138, 11
               

               Conread position:
               297-641
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               32, 6
               

               Conread position:
               301-517
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-590
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-620
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               301-634
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 146
               

               Conread position:
               301-638
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-639
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               301-641
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               112, 97
               

               Conread position:
               301-641
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               301-641
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               314-634
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               205, 218
               

               Conread position:
               314-641
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               15, 136
               

               Conread position:
               323-560
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               323-634
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-640
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               33, 40
               

               Conread position:
               324-641
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               281, 258
               

               Conread position:
               353-562
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               360-641
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               362-638
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               142, 136
               

               Conread position:
               363-640
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               74, 82
               

               Conread position:
               381-639
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 67
               
Show alignments to all cow chromosomes.