Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 135-639 |
| Cow position: | chr17:41440947-41440446 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 317 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 82, 73 |
| Conread position: | 135-640 |
| Cow position: | chr17:22452373-22451871 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 135-640 |
| Cow position: | chr17:22552844-22552342 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 135-641 |
| Cow position: | chr17:41441115-41440612 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 453, 158 |
| Conread position: | 138-628 |
| Cow position: | chr17:22452286-22451799 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 182, 144 |
| Conread position: | 149-634 |
| Cow position: | chr17:41440849-41440367 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 446, 107 |
| Conread position: | 151-634 |
| Cow position: | chr17:22552324-22551844 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 152-641 |
| Cow position: | chr17:41440678-41440192 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 446, 150 |
| Conread position: | 257-640 |
| Cow position: | chr17:22552136-22551754 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 268-640 |
| Cow position: | chr17:22552459-22552090 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 222, 37 |
| Conread position: | 269-634 |
| Cow position: | chr17:22552375-22552012 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 35 |
| Conread position: | 271-640 |
| Cow position: | chr17:22551868-22551502 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 273-639 |
| Cow position: | chr17:22552034-22551671 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 277-577 |
| Cow position: | chr17:22551778-22551481 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 295-641 |
| Cow position: | chr17:22553107-22552761 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 301-634 |
| Cow position: | chr17:22552513-22552180 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 301-640 |
| Cow position: | chr17:22499308-22498969 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 294, 281 |
| Conread position: | 303-641 |
| Cow position: | chr17:41441118-41440780 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 245, 252 |
| Conread position: | 361-641 |
| Cow position: | chr17:22452234-22451954 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 51 |
Show alignments to all cow chromosomes.