Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 131-641 |
| Cow position: | chr18:55497702-55497194 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 134-593 |
| Cow position: | chr18:56391422-56390968 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 134-635 |
| Cow position: | chr18:1418095-1418592 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 310 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 134-640 |
| Cow position: | chr18:53635531-53635030 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 144, 6 |
| Conread position: | 134-640 |
| Cow position: | chr18:56128634-56129135 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 316 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 131, 6 |
| Conread position: | 134-641 |
| Cow position: | chr18:52012098-52011595 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 144, 6 |
| Conread position: | 135-583 |
| Cow position: | chr18:49032533-49032088 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 297, 168 |
| Conread position: | 135-591 |
| Cow position: | chr18:56494021-56494473 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 83, 73 |
| Conread position: | 135-622 |
| Cow position: | chr18:51400709-51401193 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 144 |
| Conread position: | 135-628 |
| Cow position: | chr18:51400625-51401115 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 135-630 |
| Cow position: | chr18:53586738-53586246 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 301 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 153, 145 |
| Conread position: | 135-631 |
| Cow position: | chr18:56329590-56329097 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 135-635 |
| Cow position: | chr18:53610206-53609709 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 143, 128 |
| Conread position: | 135-638 |
| Cow position: | chr18:56329338-56328838 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 315 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 135, 121 |
| Conread position: | 135-640 |
| Cow position: | chr18:1418011-1418513 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 124, 141 |
| Conread position: | 135-640 |
| Cow position: | chr18:42791897-42792399 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 87 |
| Conread position: | 135-640 |
| Cow position: | chr18:49032953-49032451 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 135-640 |
| Cow position: | chr18:56128298-56128800 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 183, 161 |
| Conread position: | 135-641 |
| Cow position: | chr18:40306346-40306849 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 135-641 |
| Cow position: | chr18:42693871-42693368 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 135-641 |
| Cow position: | chr18:49032785-49032282 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 220, 161 |
| Conread position: | 135-641 |
| Cow position: | chr18:49033037-49032534 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 135-641 |
| Cow position: | chr18:49033289-49032786 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 321 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 135-641 |
| Cow position: | chr18:52012350-52011847 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 135-641 |
| Cow position: | chr18:53610290-53609787 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 145 |
| Conread position: | 135-641 |
| Cow position: | chr18:53635951-53635448 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 311 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 135-641 |
| Cow position: | chr18:56128214-56128717 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 135-641 |
| Cow position: | chr18:56316142-56316645 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 135-641 |
| Cow position: | chr18:56316310-56316813 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 459, 161 |
| Conread position: | 135-641 |
| Cow position: | chr18:56329842-56329339 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 323 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 126, 133 |
| Conread position: | 135-641 |
| Cow position: | chr18:56330010-56329507 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 73 |
| Conread position: | 135-644 |
| Cow position: | chr18:49032617-49032111 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 53 |
| Conread position: | 135-651 |
| Cow position: | chr18:55497529-55497019 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 52, 58 |
| Conread position: | 136-590 |
| Cow position: | chr18:50246339-50246789 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 120 |
| Conread position: | 137-631 |
| Cow position: | chr18:55067099-55066608 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 139-640 |
| Cow position: | chr18:51400377-51400875 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 307 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 118, 141 |
| Conread position: | 142-641 |
| Cow position: | chr18:56316569-56317065 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 307 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 136, 120 |
| Conread position: | 149-640 |
| Cow position: | chr18:49033191-49032703 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 305 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 291, 114 |
| Conread position: | 150-641 |
| Cow position: | chr18:50059179-50058691 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 151-641 |
| Cow position: | chr18:56329406-56328919 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 177-630 |
| Cow position: | chr18:43168095-43168545 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 337, 126 |
| Conread position: | 233-641 |
| Cow position: | chr18:56329576-56329171 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 202, 63 |
| Conread position: | 234-641 |
| Cow position: | chr18:56128649-56129053 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 244-640 |
| Cow position: | chr18:42985274-42984881 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 256-639 |
| Cow position: | chr18:33064808-33064428 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 248, 40 |
| Conread position: | 256-641 |
| Cow position: | chr18:49022608-49022990 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 266-631 |
| Cow position: | chr18:53559982-53560344 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 266-640 |
| Cow position: | chr18:33093050-33092679 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 269-635 |
| Cow position: | chr18:42693906-42693542 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 25 |
| Conread position: | 270-590 |
| Cow position: | chr18:50083930-50084246 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 272-630 |
| Cow position: | chr18:50848817-50849172 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 277-591 |
| Cow position: | chr18:33064619-33064309 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 277-639 |
| Cow position: | chr18:50083853-50084212 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 277-640 |
| Cow position: | chr18:33064031-33063671 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 277-640 |
| Cow position: | chr18:50271612-50271972 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 277-641 |
| Cow position: | chr18:33064535-33064174 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 279-641 |
| Cow position: | chr18:56330118-56329759 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 283-580 |
| Cow position: | chr18:56316542-56316836 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 284-591 |
| Cow position: | chr18:40306663-40306966 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 284-636 |
| Cow position: | chr18:56267470-56267120 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 348, 12 |
| Conread position: | 284-641 |
| Cow position: | chr18:53635634-53635280 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 311, 9 |
| Conread position: | 284-641 |
| Cow position: | chr18:56128531-56128885 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 311, 9 |
| Conread position: | 285-640 |
| Cow position: | chr18:50059380-50059028 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 285-640 |
| Cow position: | chr18:50059464-50059112 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 285-640 |
| Cow position: | chr18:50281917-50282269 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 287-589 |
| Cow position: | chr18:55523553-55523851 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 287-631 |
| Cow position: | chr18:55523637-55523978 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 295-568 |
| Cow position: | chr18:44398441-44398168 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 295-640 |
| Cow position: | chr18:43167790-43168135 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 295-640 |
| Cow position: | chr18:43168126-43168471 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 295-641 |
| Cow position: | chr18:33064352-33064006 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 295-641 |
| Cow position: | chr18:49022728-49023074 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 295-641 |
| Cow position: | chr18:50848669-50849015 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 295-642 |
| Cow position: | chr18:53525858-53526204 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 135, 117 |
| Conread position: | 296-641 |
| Cow position: | chr18:49033383-49033038 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 297-607 |
| Cow position: | chr18:53498478-53498786 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 130, 6 |
| Conread position: | 297-622 |
| Cow position: | chr18:44397850-44397526 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 142, 12 |
| Conread position: | 297-639 |
| Cow position: | chr18:42791049-42791390 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 297-640 |
| Cow position: | chr18:1418003-1418345 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 193, 6 |
| Conread position: | 297-640 |
| Cow position: | chr18:41198248-41198590 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 297-641 |
| Cow position: | chr18:49022815-49023158 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 291, 6 |
| Conread position: | 297-641 |
| Cow position: | chr18:53586410-53586067 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 300-639 |
| Cow position: | chr18:14454017-14453680 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 300-640 |
| Cow position: | chr18:42744462-42744122 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 135, 148 |
| Conread position: | 300-640 |
| Cow position: | chr18:43093499-43093159 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 20, 24 |
| Conread position: | 300-640 |
| Cow position: | chr18:43093667-43093327 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 300-641 |
| Cow position: | chr18:50848422-50848763 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 301-506 |
| Cow position: | chr18:49032286-49032081 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 111 |
| Conread position: | 301-578 |
| Cow position: | chr18:49021739-49022016 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 301-590 |
| Cow position: | chr18:33064850-33064562 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 139, 130 |
| Conread position: | 301-590 |
| Cow position: | chr18:41197579-41197867 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 301-590 |
| Cow position: | chr18:52447868-52448156 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 137, 147 |
| Conread position: | 301-590 |
| Cow position: | chr18:53610295-53610007 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 301-590 |
| Cow position: | chr18:53635704-53635416 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 301-628 |
| Cow position: | chr18:42674729-42674402 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 138, 147 |
| Conread position: | 301-628 |
| Cow position: | chr18:43093162-43092835 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 137, 147 |
| Conread position: | 301-631 |
| Cow position: | chr18:42744293-42743963 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 136, 147 |
| Conread position: | 301-631 |
| Cow position: | chr18:42792564-42792894 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 301-634 |
| Cow position: | chr18:50058863-50058530 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 291, 281 |
| Conread position: | 301-634 |
| Cow position: | chr18:52012103-52011770 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 301-637 |
| Cow position: | chr18:42837428-42837092 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 301-640 |
| Cow position: | chr18:14453932-14453593 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 137, 147 |
| Conread position: | 301-640 |
| Cow position: | chr18:33064178-33063839 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 301-640 |
| Cow position: | chr18:33064430-33064091 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 301-640 |
| Cow position: | chr18:41198167-41198506 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 301-640 |
| Cow position: | chr18:42675233-42674894 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 203, 195 |
| Conread position: | 301-640 |
| Cow position: | chr18:44398351-44398012 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 134, 146 |
| Conread position: | 301-640 |
| Cow position: | chr18:51812796-51812457 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-640 |
| Cow position: | chr18:53610379-53610040 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 301-641 |
| Cow position: | chr18:1418090-1418430 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 301-641 |
| Cow position: | chr18:42792228-42792568 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 301-641 |
| Cow position: | chr18:49033294-49032954 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 301-641 |
| Cow position: | chr18:52012019-52011679 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 291, 298 |
| Conread position: | 301-641 |
| Cow position: | chr18:52012355-52012015 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 24 |
| Conread position: | 301-641 |
| Cow position: | chr18:56316053-56316393 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 301-641 |
| Cow position: | chr18:56330015-56329675 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 301-642 |
| Cow position: | chr18:43048724-43048383 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 302-595 |
| Cow position: | chr18:53636039-53635747 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 302-634 |
| Cow position: | chr18:56494017-56494349 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 302-640 |
| Cow position: | chr18:56128126-56128464 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 302-641 |
| Cow position: | chr18:49022233-49022572 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 256, 227 |
| Conread position: | 302-641 |
| Cow position: | chr18:53610462-53610123 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 302-641 |
| Cow position: | chr18:55497617-55497278 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 303-634 |
| Cow position: | chr18:53586910-53586578 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 303-640 |
| Cow position: | chr18:42985302-42984965 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 308-496 |
| Cow position: | chr18:50282105-50282293 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 308-640 |
| Cow position: | chr18:42837841-42837509 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 117, 104 |
| Conread position: | 310-640 |
| Cow position: | chr18:41949335-41949005 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 311-641 |
| Cow position: | chr18:50295202-50295532 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 114, 134 |
| Conread position: | 312-641 |
| Cow position: | chr18:50281857-50282186 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 318-641 |
| Cow position: | chr18:50059601-50059279 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 186, 6 |
| Conread position: | 319-640 |
| Cow position: | chr18:42675298-42674978 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 114, 5 |
| Conread position: | 323-640 |
| Cow position: | chr18:51400642-51400959 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 175, 193 |
| Conread position: | 324-590 |
| Cow position: | chr18:55067083-55066817 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 324-634 |
| Cow position: | chr18:50281785-50282095 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 324-634 |
| Cow position: | chr18:56267517-56267207 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 273, 259 |
| Conread position: | 324-639 |
| Cow position: | chr18:50246272-50246587 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 102, 110 |
| Conread position: | 324-639 |
| Cow position: | chr18:50246440-50246755 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 324-640 |
| Cow position: | chr18:50083309-50083625 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 113, 123 |
| Conread position: | 324-640 |
| Cow position: | chr18:50099338-50099654 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 324-640 |
| Cow position: | chr18:50246356-50246672 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 324-640 |
| Cow position: | chr18:51812605-51812289 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 264, 258 |
| Conread position: | 324-644 |
| Cow position: | chr18:42827431-42827749 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 328-640 |
| Cow position: | chr18:51368068-51367756 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 331-639 |
| Cow position: | chr18:50271578-50271887 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 331-640 |
| Cow position: | chr18:50031033-50030724 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 351-581 |
| Cow position: | chr18:52011801-52011571 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 353-644 |
| Cow position: | chr18:1417974-1418263 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 354-631 |
| Cow position: | chr18:52428614-52428891 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 94 |
| Conread position: | 354-631 |
| Cow position: | chr18:52433795-52434072 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 94 |
| Conread position: | 362-634 |
| Cow position: | chr18:53586430-53586158 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 124 |
| Conread position: | 363-631 |
| Cow position: | chr18:56248175-56247909 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 229, 12 |
| Conread position: | 363-640 |
| Cow position: | chr18:50058717-50058442 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 127, 123 |
| Conread position: | 363-640 |
| Cow position: | chr18:50059641-50059364 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 135, 123 |
| Conread position: | 368-640 |
| Cow position: | chr18:56316036-56316308 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 6 |
| Conread position: | 368-641 |
| Cow position: | chr18:43048741-43048468 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 80 |
| Conread position: | 375-640 |
| Cow position: | chr18:50281752-50282017 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 375-641 |
| Cow position: | chr18:42792470-42792736 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 241, 236 |
| Conread position: | 377-639 |
| Cow position: | chr18:42827399-42827662 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 235 |
Show alignments to all cow chromosomes.