Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 135-622 |
| Cow position: | chr19:14940585-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 183, 168 |
| Conread position: | 135-628 |
| Cow position: | chr19:23614617-23615107 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 303 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 194, 168 |
| Conread position: | 135-630 |
| Cow position: | chr19:23649647-23650139 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 185, 158 |
| Conread position: | 135-634 |
| Cow position: | chr19:23649311-23649807 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 137, 128 |
| Conread position: | 135-640 |
| Cow position: | chr19:23596957-23597456 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 134, 73 |
| Conread position: | 135-640 |
| Cow position: | chr19:23649563-23650065 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 135-640 |
| Cow position: | chr19:23649731-23650233 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 94 |
| Conread position: | 136-641 |
| Cow position: | chr19:23649396-23649898 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 150-640 |
| Cow position: | chr19:14960367-14959882 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 240-634 |
| Cow position: | chr19:23650088-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 197, 56 |
| Conread position: | 271-640 |
| Cow position: | chr19:23597258-23597624 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 161, 32 |
| Conread position: | 288-640 |
| Cow position: | chr19:14959248-14958905 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 300, 15 |
| Conread position: | 297-641 |
| Cow position: | chr19:20678288-20678631 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 300-641 |
| Cow position: | chr19:14960388-14960049 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 288, 228 |
| Conread position: | 301-622 |
| Cow position: | chr19:14948379-14948058 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 301-634 |
| Cow position: | chr19:14940160-14940493 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-639 |
| Cow position: | chr19:23649978-23650316 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 146 |
| Conread position: | 301-640 |
| Cow position: | chr19:23649306-23649645 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 203, 197 |
| Conread position: | 301-641 |
| Cow position: | chr19:14940664-14941004 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 132, 114 |
| Conread position: | 301-641 |
| Cow position: | chr19:23650062-23650402 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 124, 111 |
| Conread position: | 303-587 |
| Cow position: | chr19:20677705-20677988 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 323-640 |
| Cow position: | chr19:14940518-14940835 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 102, 89 |
| Conread position: | 324-640 |
| Cow position: | chr19:14940015-14940331 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 114, 91 |
| Conread position: | 324-640 |
| Cow position: | chr19:23614299-23614615 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 361-631 |
| Cow position: | chr19:14940136-14940406 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 244, 255 |
| Conread position: | 363-641 |
| Cow position: | chr19:23614422-23614700 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 141, 134 |
| Conread position: | 375-640 |
| Cow position: | chr19:20635555-20635290 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 60, 69 |
Show alignments to all cow chromosomes.