Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 134-638 |
| Cow position: | chr21:12608419-12607919 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 191, 6 |
| Conread position: | 135-558 |
| Cow position: | chr21:34222961-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 135-562 |
| Cow position: | chr21:34223045-34222621 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 185, 128 |
| Conread position: | 135-634 |
| Cow position: | chr21:12608839-12608343 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 135-639 |
| Cow position: | chr21:12608755-12608254 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 135-641 |
| Cow position: | chr21:12658839-12659342 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 135-641 |
| Cow position: | chr21:12659007-12659510 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 161 |
| Conread position: | 135-641 |
| Cow position: | chr21:12659175-12659678 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 73 |
| Conread position: | 135-641 |
| Cow position: | chr21:12659343-12659846 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 169 |
| Conread position: | 135-641 |
| Cow position: | chr21:12659427-12659930 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 135-641 |
| Cow position: | chr21:12659511-12660014 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 315 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 138-641 |
| Cow position: | chr21:12658926-12659426 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 158 |
| Conread position: | 143-640 |
| Cow position: | chr21:12608495-12608001 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 283-641 |
| Cow position: | chr21:34222981-34222626 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 296-641 |
| Cow position: | chr21:12608930-12608588 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 300, 16 |
| Conread position: | 301-641 |
| Cow position: | chr21:12608844-12608504 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 231, 226 |
| Conread position: | 301-641 |
| Cow position: | chr21:12658834-12659174 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-639 |
| Cow position: | chr21:34223027-34222712 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 351-641 |
| Cow position: | chr21:12658800-12659090 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-641 |
| Cow position: | chr21:34223051-34222794 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.