Cow genome map


           Conread name:
           Ss1.1-Mixn-0004k05.5
        

               Conread position:
               135-590
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 81
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               121, 132
               

               Conread position:
               144-641
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               304
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               125, 118
               

               Conread position:
               269-644
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               277-494
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               277-590
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 19
               

               Conread position:
               277-640
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               277-640
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               277-640
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               283-589
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               288-629
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               244, 15
               

               Conread position:
               290-641
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               304, 12
               

               Conread position:
               292-641
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               295-590
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 60
               

               Conread position:
               297-640
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               297-640
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               297-641
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               301-584
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               301-592
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 111
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 52
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               119, 101
               

               Conread position:
               301-641
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               126, 114
               

               Conread position:
               301-641
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               304, 281
               

               Conread position:
               308-635
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               287, 274
               

               Conread position:
               324-641
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               271, 258
               

               Conread position:
               324-641
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               119, 124
               

               Conread position:
               325-641
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               110, 122
               

               Conread position:
               328-640
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               351-640
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               139, 135
               

               Conread position:
               351-641
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               139, 135
               

               Conread position:
               354-644
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               363-640
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               367-640
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               381-640
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               207, 201
               

               Conread position:
               382-643
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               58, 33
               
Show alignments to all cow chromosomes.