Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 135-506 |
| Cow position: | chr23:24639727-24640095 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 126, 132 |
| Conread position: | 135-569 |
| Cow position: | chr23:24639643-24640074 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 143, 135 |
| Conread position: | 135-590 |
| Cow position: | chr23:25660242-25660693 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 305, 158 |
| Conread position: | 135-641 |
| Cow position: | chr23:24639475-24639978 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 319 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 138-640 |
| Cow position: | chr23:24560712-24560213 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 318 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 182, 164 |
| Conread position: | 139-639 |
| Cow position: | chr23:25660162-25660659 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 300, 164 |
| Conread position: | 141-640 |
| Cow position: | chr23:24560877-24560381 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 127 |
| Conread position: | 142-639 |
| Cow position: | chr23:24639398-24639892 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 150-602 |
| Cow position: | chr23:24547140-24546691 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 170, 153 |
| Conread position: | 151-630 |
| Cow position: | chr23:24560615-24560139 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 297 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 169, 142 |
| Conread position: | 256-641 |
| Cow position: | chr23:24535830-24535451 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 268-640 |
| Cow position: | chr23:24522680-24522311 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 170, 75 |
| Conread position: | 268-640 |
| Cow position: | chr23:25626506-25626872 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 333, 26 |
| Conread position: | 268-641 |
| Cow position: | chr23:24547274-24546904 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 270-629 |
| Cow position: | chr23:25724072-25723713 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 86 |
| Conread position: | 277-640 |
| Cow position: | chr23:24626373-24626733 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 277-640 |
| Cow position: | chr23:24639449-24639809 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 278-641 |
| Cow position: | chr23:24560827-24560464 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 73, 86 |
| Conread position: | 295-641 |
| Cow position: | chr23:24522571-24522226 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 301-641 |
| Cow position: | chr23:24547160-24546820 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 301-648 |
| Cow position: | chr23:24639722-24640069 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 308-641 |
| Cow position: | chr23:24535868-24535535 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 323-641 |
| Cow position: | chr23:25660175-25660493 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 181, 175 |
| Conread position: | 324-640 |
| Cow position: | chr23:24547305-24546989 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 367-640 |
| Cow position: | chr23:25660134-25660408 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 377-640 |
| Cow position: | chr23:24626302-24626565 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 218, 205 |
Show alignments to all cow chromosomes.