Cow genome map


           Conread name:
           Ss1.1-Mixn-0004k05.5
        

               Conread position:
               133-590
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               134-629
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               294
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               385, 169
               

               Conread position:
               135-546
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               119, 113
               

               Conread position:
               135-568
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               74, 83
               

               Conread position:
               135-589
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               143, 128
               

               Conread position:
               135-589
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 80
               

               Conread position:
               135-634
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 73
               

               Conread position:
               135-638
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               322
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               52, 57
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 72
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               320
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               176, 160
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               316
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               49, 45
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 128
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               305
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               74, 80
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               185, 170
               

               Conread position:
               135-640
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               305
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               300, 161
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               314
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               186, 161
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               143, 128
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 145
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               38, 48
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               320
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               72, 80
               

               Conread position:
               135-641
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               113, 136
               

               Conread position:
               135-691
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               137-590
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               138-628
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               181, 118
               

               Conread position:
               138-641
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               294
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               138-641
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               305
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               117, 143
               

               Conread position:
               139-641
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               318
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               180, 157
               

               Conread position:
               143-555
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 72
               

               Conread position:
               143-560
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               347, 153
               

               Conread position:
               143-643
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               308
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               211, 90
               

               Conread position:
               143-644
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               309
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               132, 103
               

               Conread position:
               144-628
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 74
               

               Conread position:
               144-640
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               117, 124
               

               Conread position:
               150-641
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               301
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               153-592
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 62
               

               Conread position:
               233-634
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               233-640
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               121, 63
               

               Conread position:
               234-640
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               270-641
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               271-641
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               273-641
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               340, 23
               

               Conread position:
               274-633
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-631
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               277-641
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               279-633
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               284-640
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               285-607
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               285-622
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               292-634
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               203, 208
               

               Conread position:
               295-641
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               295-641
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               295-641
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               293, 287
               

               Conread position:
               296-641
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               297-639
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               296, 304
               

               Conread position:
               297-639
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               23, 27
               

               Conread position:
               299-641
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               138, 124
               

               Conread position:
               299-641
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               100, 41
               

               Conread position:
               301-561
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 103
               

               Conread position:
               301-569
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-584
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-590
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               301-629
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               301-630
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               231, 226
               

               Conread position:
               301-630
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               204, 197
               

               Conread position:
               301-631
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               294, 282
               

               Conread position:
               301-634
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               301-635
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               301-640
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               301-641
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               139, 134
               

               Conread position:
               301-641
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               204, 197
               

               Conread position:
               302-641
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               313-641
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               319-589
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               38, 5
               

               Conread position:
               321-630
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               268, 0
               

               Conread position:
               323-562
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               323-589
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               323-634
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 79
               

               Conread position:
               323-640
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               198, 175
               

               Conread position:
               323-641
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               284, 259
               

               Conread position:
               323-645
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-629
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-634
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               271, 258
               

               Conread position:
               324-640
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 60
               

               Conread position:
               324-640
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               114, 123
               

               Conread position:
               324-641
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 173
               

               Conread position:
               324-641
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               109, 124
               

               Conread position:
               327-640
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 37
               

               Conread position:
               328-634
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 120
               

               Conread position:
               334-634
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               352-640
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 96
               

               Conread position:
               363-635
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               141, 153
               

               Conread position:
               363-641
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               128, 52
               

               Conread position:
               374-639
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               378-640
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               384-641
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               969-1328
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               1181-1328
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.