Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 135-568 |
| Cow position: | chr28:34696170-34696598 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 183, 158 |
| Conread position: | 135-630 |
| Cow position: | chr28:34696086-34696578 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 310 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 126, 97 |
| Conread position: | 135-641 |
| Cow position: | chr28:7757758-7758261 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 125, 141 |
| Conread position: | 136-640 |
| Cow position: | chr28:7757508-7758008 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 8 |
| Conread position: | 143-640 |
| Cow position: | chr28:9253033-9253527 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 311 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 272-630 |
| Cow position: | chr28:7757559-7757914 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 277-631 |
| Cow position: | chr28:11333821-11333470 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 277-640 |
| Cow position: | chr28:7758472-7758831 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 293-640 |
| Cow position: | chr28:7757325-7757672 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 294-641 |
| Cow position: | chr28:34695990-34696337 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 297-589 |
| Cow position: | chr28:34673351-34673644 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 289 |
| Conread position: | 297-640 |
| Cow position: | chr28:9253017-9253359 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 299-641 |
| Cow position: | chr28:33210228-33210570 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 334, 10 |
| Conread position: | 301-634 |
| Cow position: | chr28:7757417-7757750 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 301-641 |
| Cow position: | chr28:11333884-11333544 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 301-641 |
| Cow position: | chr28:34696165-34696505 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-630 |
| Cow position: | chr28:7758028-7758334 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 325-641 |
| Cow position: | chr28:9298675-9298990 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 29 |
Show alignments to all cow chromosomes.