Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 134-640 |
| Cow position: | chr6:49340914-49341416 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 214, 10 |
| Conread position: | 135-569 |
| Cow position: | chr6:49428990-49429421 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 135-634 |
| Cow position: | chr6:49340578-49341074 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 290, 161 |
| Conread position: | 135-639 |
| Cow position: | chr6:49428906-49429407 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 146, 121 |
| Conread position: | 135-640 |
| Cow position: | chr6:49340494-49340996 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 135-641 |
| Cow position: | chr6:49428318-49428821 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 314 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 104, 99 |
| Conread position: | 135-641 |
| Cow position: | chr6:49428486-49428989 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 355, 161 |
| Conread position: | 135-641 |
| Cow position: | chr6:49428654-49429157 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 471, 161 |
| Conread position: | 135-641 |
| Cow position: | chr6:49428738-49429241 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 462, 158 |
| Conread position: | 150-641 |
| Cow position: | chr6:49428249-49428737 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 233-641 |
| Cow position: | chr6:49428248-49428653 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 291, 60 |
| Conread position: | 268-640 |
| Cow position: | chr6:49340963-49341332 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 268-641 |
| Cow position: | chr6:49340459-49340829 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 299-641 |
| Cow position: | chr6:49428227-49428569 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 323-569 |
| Cow position: | chr6:49396232-49396478 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 122 |
| Conread position: | 324-634 |
| Cow position: | chr6:49396317-49396627 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-640 |
| Cow position: | chr6:49396485-49396801 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 124 |
Show alignments to all cow chromosomes.