Cow genome map
| Conread name: | Ss1.1-Mixn-0004k05.5 |
| Conread position: | 134-522 |
| Cow position: | chr7:18390420-18390804 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 135-628 |
| Cow position: | chr7:42878766-42878276 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 304 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 135-640 |
| Cow position: | chr7:3180375-3180876 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 120, 134 |
| Conread position: | 135-640 |
| Cow position: | chr7:42878934-42878432 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 184, 158 |
| Conread position: | 264-630 |
| Cow position: | chr7:18390382-18390744 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 271-640 |
| Cow position: | chr7:42878966-42878600 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 274-590 |
| Cow position: | chr7:1439952-1440264 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 277-640 |
| Cow position: | chr7:18390226-18390586 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 163, 25 |
| Conread position: | 290-641 |
| Cow position: | chr7:18390152-18390503 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 297-634 |
| Cow position: | chr7:3180031-3180367 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 297-641 |
| Cow position: | chr7:18390328-18390671 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 299-641 |
| Cow position: | chr7:42879193-42878851 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-590 |
| Cow position: | chr7:18390499-18390787 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 301-634 |
| Cow position: | chr7:11600850-11600517 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 134, 146 |
| Conread position: | 301-640 |
| Cow position: | chr7:3179782-3180121 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 139, 130 |
| Conread position: | 301-640 |
| Cow position: | chr7:3180118-3180457 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 301-640 |
| Cow position: | chr7:42879107-42878768 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 313-562 |
| Cow position: | chr7:12293613-12293862 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-641 |
| Cow position: | chr7:3179710-3180038 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 113, 102 |
| Conread position: | 324-640 |
| Cow position: | chr7:42879000-42878684 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 121 |
| Conread position: | 352-640 |
| Cow position: | chr7:11600883-11600595 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 248, 262 |
| Conread position: | 375-634 |
| Cow position: | chr7:3180528-3180787 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 393-639 |
| Cow position: | chr7:3179706-3179952 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 111, 105 |
Show alignments to all cow chromosomes.