Cow genome map


           Conread name:
           Ss1.1-Mixn-0006b24.5
        

               Conread position:
               294-865
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               317-873
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               226, 219
               

               Conread position:
               321-592
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               222, 215
               

               Conread position:
               321-698
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               272, 279
               

               Conread position:
               321-702
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               137, 128
               

               Conread position:
               331-696
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               209, 203
               

               Conread position:
               331-696
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 131
               

               Conread position:
               331-781
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               331-855
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               331-858
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 131
               

               Conread position:
               331-858
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               321
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               200, 191
               

               Conread position:
               331-869
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               310, 317
               

               Conread position:
               331-869
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               323
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               130, 116
               

               Conread position:
               331-869
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               297, 284
               

               Conread position:
               331-871
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               336
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               331-871
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               327
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               331-871
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               331-871
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 146
               

               Conread position:
               331-873
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               327
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               205, 224
               

               Conread position:
               331-873
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 56
               

               Conread position:
               332-704
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               279, 257
               

               Conread position:
               332-753
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 112
               

               Conread position:
               332-768
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 130
               

               Conread position:
               332-776
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               332-858
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               319
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               118, 130
               

               Conread position:
               332-866
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               319
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               309, 313
               

               Conread position:
               332-869
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               309, 315
               

               Conread position:
               332-871
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               310, 316
               

               Conread position:
               332-871
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               310, 97
               

               Conread position:
               332-873
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               204, 215
               

               Conread position:
               332-873
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               324
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               309, 313
               

               Conread position:
               334-867
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               332
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               136, 113
               

               Conread position:
               335-867
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               322
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               136, 115
               

               Conread position:
               337-869
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               318
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 44
               

               Conread position:
               337-869
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 96
               

               Conread position:
               338-787
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               222, 227
               

               Conread position:
               338-858
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               210, 228
               

               Conread position:
               338-865
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 94
               

               Conread position:
               338-899
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               334
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               342-753
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               118, 105
               

               Conread position:
               342-844
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               308
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               342-855
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 108
               

               Conread position:
               342-864
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               128, 105
               

               Conread position:
               342-864
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               308
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               342-866
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 108
               

               Conread position:
               342-873
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               327
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               84, 91
               

               Conread position:
               344-864
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               319
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               344-864
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               306
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               345-858
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               119, 126
               

               Conread position:
               346-872
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               458, 436
               

               Conread position:
               346-898
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               335
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 41
               

               Conread position:
               347-871
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               33, 40
               

               Conread position:
               386-781
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               121, 117
               

               Conread position:
               386-865
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 47
               

               Conread position:
               386-871
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               121, 117
               

               Conread position:
               386-873
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               297
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               171, 180
               

               Conread position:
               390-838
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               251, 227
               

               Conread position:
               390-871
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               240, 231
               

               Conread position:
               392-866
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               240, 228
               

               Conread position:
               394-865
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               203, 218
               

               Conread position:
               394-894
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               197, 192
               

               Conread position:
               396-700
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               242, 237
               

               Conread position:
               396-872
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               240, 224
               

               Conread position:
               460-882
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 117
               

               Conread position:
               470-898
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               162, 179
               

               Conread position:
               488-897
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               135, 119
               

               Conread position:
               491-865
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               150, 154
               
Show alignments to all cow chromosomes.