Cow genome map
| Conread name: | Ss1.1-Mixn-0006b24.5 |
| Conread position: | 316-686 |
| Cow position: | chr17:22473582-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 343, 15 |
| Conread position: | 321-872 |
| Cow position: | chr17:22553104-22552553 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 339 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 139, 121 |
| Conread position: | 326-705 |
| Cow position: | chr17:22452124-22451745 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 124 |
| Conread position: | 331-735 |
| Cow position: | chr17:22452203-22451799 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 127, 109 |
| Conread position: | 331-761 |
| Cow position: | chr17:22499385-22498955 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 280, 272 |
| Conread position: | 331-864 |
| Cow position: | chr17:22552590-22552057 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 226, 235 |
| Conread position: | 331-865 |
| Cow position: | chr17:22589756-22589222 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 317 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 331-868 |
| Cow position: | chr17:22552254-22551717 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 119 |
| Conread position: | 331-870 |
| Cow position: | chr17:22552086-22551547 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 129, 105 |
| Conread position: | 331-872 |
| Cow position: | chr17:22552506-22551965 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 345 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 200, 194 |
| Conread position: | 331-875 |
| Cow position: | chr17:22452371-22451828 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 131, 111 |
| Conread position: | 331-899 |
| Cow position: | chr17:22552758-22552190 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 350 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 331-899 |
| Cow position: | chr17:22590260-22589692 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 212, 199 |
| Conread position: | 332-752 |
| Cow position: | chr17:22473513-22473934 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 332-858 |
| Cow position: | chr17:22552841-22552315 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 120 |
| Conread position: | 332-864 |
| Cow position: | chr17:22590007-22589475 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 131 |
| Conread position: | 332-864 |
| Cow position: | chr17:22590175-22589643 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 128, 123 |
| Conread position: | 332-867 |
| Cow position: | chr17:22499300-22498765 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 307 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 310, 319 |
| Conread position: | 332-873 |
| Cow position: | chr17:22473345-22473886 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 333 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 128, 105 |
| Conread position: | 333-866 |
| Cow position: | chr17:22473262-22473795 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 329 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 198, 186 |
| Conread position: | 334-872 |
| Cow position: | chr17:22552671-22552133 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 347-753 |
| Cow position: | chr17:22551902-22551496 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 108 |
| Conread position: | 347-872 |
| Cow position: | chr17:22452271-22451746 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 325 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 113, 95 |
| Conread position: | 347-872 |
| Cow position: | chr17:22552910-22552385 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 326 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 113, 94 |
| Conread position: | 376-899 |
| Cow position: | chr17:22452410-22451887 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 162, 145 |
| Conread position: | 408-864 |
| Cow position: | chr17:22590267-22589811 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 52, 33 |
Show alignments to all cow chromosomes.