Cow genome map
| Conread name: | Ss1.1-Mixn-0006b24.5 |
| Conread position: | 324-871 |
| Cow position: | chr19:14940412-14940959 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 221, 202 |
| Conread position: | 325-873 |
| Cow position: | chr19:23649896-23650443 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 339 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 132, 7 |
| Conread position: | 330-704 |
| Cow position: | chr19:14948373-14947999 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 103 |
| Conread position: | 330-870 |
| Cow position: | chr19:23597039-23597579 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 287, 298 |
| Conread position: | 331-693 |
| Cow position: | chr19:43570045-43569687 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 140, 126 |
| Conread position: | 331-704 |
| Cow position: | chr19:14940671-14941044 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 128, 106 |
| Conread position: | 331-777 |
| Cow position: | chr19:23614619-23615064 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 331-780 |
| Cow position: | chr19:23597208-23597657 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 47, 43 |
| Conread position: | 331-858 |
| Cow position: | chr19:14940167-14940694 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 322 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 331-864 |
| Cow position: | chr19:20678046-20678578 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 119, 151 |
| Conread position: | 331-864 |
| Cow position: | chr19:20678130-20678663 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 323 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 136, 119 |
| Conread position: | 331-866 |
| Cow position: | chr19:23613779-23614314 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 331-867 |
| Cow position: | chr19:23614115-23614651 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 130, 119 |
| Conread position: | 331-871 |
| Cow position: | chr19:14960380-14959842 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 335 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 128, 117 |
| Conread position: | 331-894 |
| Cow position: | chr19:23649565-23650128 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 343 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 132, 118 |
| Conread position: | 331-900 |
| Cow position: | chr19:23614031-23614600 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 343 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 303, 275 |
| Conread position: | 332-700 |
| Cow position: | chr19:20677795-20678163 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 266, 261 |
| Conread position: | 332-830 |
| Cow position: | chr19:20635537-20635039 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 307 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 332-838 |
| Cow position: | chr19:23649818-23650324 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 332-857 |
| Cow position: | chr19:23613864-23614389 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 280, 270 |
| Conread position: | 332-858 |
| Cow position: | chr19:14940252-14940778 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 319 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 444, 468 |
| Conread position: | 332-859 |
| Cow position: | chr19:23613612-23614139 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 50 |
| Conread position: | 332-866 |
| Cow position: | chr19:20677879-20678413 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 308 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 117, 146 |
| Conread position: | 332-870 |
| Cow position: | chr19:23649398-23649936 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 327 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 298, 288 |
| Conread position: | 332-899 |
| Cow position: | chr19:23614536-23615103 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 347 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 135, 109 |
| Conread position: | 335-860 |
| Cow position: | chr19:14940087-14940612 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 125, 102 |
| Conread position: | 335-866 |
| Cow position: | chr19:20677630-20678161 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 333 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 114, 140 |
| Conread position: | 338-700 |
| Cow position: | chr19:23597299-23597662 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 338-873 |
| Cow position: | chr19:14940006-14940541 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 123, 104 |
| Conread position: | 344-899 |
| Cow position: | chr19:23596972-23597524 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 334 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 365, 63 |
| Conread position: | 346-825 |
| Cow position: | chr19:23650000-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 132, 95 |
| Conread position: | 347-591 |
| Cow position: | chr19:14959626-14959382 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 365-754 |
| Cow position: | chr19:23614400-23614790 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 376-699 |
| Cow position: | chr19:14959186-14958869 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 378-873 |
| Cow position: | chr19:14960417-14959924 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 385-755 |
| Cow position: | chr19:20635400-20635030 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 78, 70 |
| Conread position: | 386-774 |
| Cow position: | chr19:14948484-14948097 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 386-782 |
| Cow position: | chr19:43570242-43569846 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 85, 71 |
| Conread position: | 386-869 |
| Cow position: | chr19:23613582-23614065 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 386-873 |
| Cow position: | chr19:14940558-14941045 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 391-858 |
| Cow position: | chr19:20635646-20635179 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 203, 216 |
| Conread position: | 408-864 |
| Cow position: | chr19:23613352-23613808 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 465-873 |
| Cow position: | chr19:23649447-23649855 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 176, 184 |
| Conread position: | 482-866 |
| Cow position: | chr19:20635639-20635255 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 128, 120 |
Show alignments to all cow chromosomes.