Cow genome map
| Conread name: | Ss1.1-Mixn-0006b24.5 |
| Conread position: | 321-615 |
| Cow position: | chr2:82800113-82800407 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 131 |
| Conread position: | 321-873 |
| Cow position: | chr2:82799609-82800161 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 334 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 330-864 |
| Cow position: | chr2:78754924-78755456 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 112 |
| Conread position: | 331-775 |
| Cow position: | chr2:86465443-86465887 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 134, 107 |
| Conread position: | 331-781 |
| Cow position: | chr2:82799955-82800405 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 140, 126 |
| Conread position: | 331-864 |
| Cow position: | chr2:78755093-78755623 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 331-866 |
| Cow position: | chr2:78754841-78755375 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 334 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 213, 203 |
| Conread position: | 331-866 |
| Cow position: | chr2:82799535-82800070 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 327 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 140, 116 |
| Conread position: | 331-866 |
| Cow position: | chr2:86465611-86466146 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 325 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 153, 142 |
| Conread position: | 332-761 |
| Cow position: | chr2:78755429-78755855 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 332-873 |
| Cow position: | chr2:82799872-82800413 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 325 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 216, 204 |
| Conread position: | 333-859 |
| Cow position: | chr2:86465109-86465635 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 141 |
| Conread position: | 336-783 |
| Cow position: | chr2:48689527-48689082 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 352, 121 |
| Conread position: | 344-866 |
| Cow position: | chr2:78754450-78754956 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 329 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 82, 88 |
| Conread position: | 347-872 |
| Cow position: | chr2:82799467-82799992 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 210, 186 |
| Conread position: | 390-704 |
| Cow position: | chr2:48689390-48689076 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 166, 143 |
| Conread position: | 390-738 |
| Cow position: | chr2:82800098-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 298, 305 |
| Conread position: | 391-774 |
| Cow position: | chr2:78755905-78756289 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 66 |
| Conread position: | 391-872 |
| Cow position: | chr2:78754817-78755298 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 237, 216 |
| Conread position: | 403-879 |
| Cow position: | chr2:48689626-48689153 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 81 |
Show alignments to all cow chromosomes.