Cow genome map


           Conread name:
           Ss1.1-Mixn-0006b24.5
        

               Conread position:
               331-873
               

               Cow position:
               chr21:12658841-12659383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               309
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               310, 318
               

               Conread position:
               331-873
               

               Cow position:
               chr21:12659009-12659551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               321
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               272, 278
               

               Conread position:
               331-877
               

               Cow position:
               chr21:12659513-12660059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               323
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               376, 386
               

               Conread position:
               332-618
               

               Cow position:
               chr21:34222874-34222588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               337-897
               

               Cow position:
               chr21:12659183-12659743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               336
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               38, 26
               

               Conread position:
               343-865
               

               Cow position:
               chr21:12608909-12608387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 107
               

               Conread position:
               344-833
               

               Cow position:
               chr21:34223030-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               298
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               305, 276
               

               Conread position:
               386-893
               

               Cow position:
               chr21:12658980-12659487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               408-873
               

               Cow position:
               chr21:34223050-34222585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               218, 208
               

               Conread position:
               437-873
               

               Cow position:
               chr21:34223102-34222669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               199, 10
               
Show alignments to all cow chromosomes.