Cow genome map


           Conread name:
           Ss1.1-Mixn-0006b24.5
        

               Conread position:
               310-755
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               310-866
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               329
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               321-695
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 66
               

               Conread position:
               321-698
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 65
               

               Conread position:
               321-755
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               150, 132
               

               Conread position:
               321-899
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 13
               

               Conread position:
               322-874
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               340
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 234
               

               Conread position:
               324-615
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               324-747
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               221, 212
               

               Conread position:
               324-866
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               240, 198
               

               Conread position:
               328-899
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 113
               

               Conread position:
               330-865
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               329
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               141, 106
               

               Conread position:
               330-866
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               331
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               141, 127
               

               Conread position:
               330-899
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 133
               

               Conread position:
               331-699
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               133, 110
               

               Conread position:
               331-702
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               140, 126
               

               Conread position:
               331-704
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               331-736
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               140, 110
               

               Conread position:
               331-755
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               141, 119
               

               Conread position:
               331-774
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               120, 133
               

               Conread position:
               331-835
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               331-864
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               316
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               310, 314
               

               Conread position:
               331-866
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               321
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               140, 110
               

               Conread position:
               331-866
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 206
               

               Conread position:
               331-866
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               262, 268
               

               Conread position:
               331-866
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               328
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               281, 276
               

               Conread position:
               331-866
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               131, 117
               

               Conread position:
               331-873
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               131, 110
               

               Conread position:
               331-899
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               348
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               139, 110
               

               Conread position:
               331-909
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               345
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               139, 110
               

               Conread position:
               332-584
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               332-668
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               332-774
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               130, 118
               

               Conread position:
               332-858
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               322
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               129, 123
               

               Conread position:
               332-864
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               329
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               128, 110
               

               Conread position:
               332-865
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               334
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               131, 118
               

               Conread position:
               332-866
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               324
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               138, 115
               

               Conread position:
               332-868
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               335
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               114, 130
               

               Conread position:
               332-871
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               332
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               309, 314
               

               Conread position:
               332-872
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               335
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               199, 187
               

               Conread position:
               332-872
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               334
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               199, 186
               

               Conread position:
               332-873
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               204, 213
               

               Conread position:
               332-873
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               332-873
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 38
               

               Conread position:
               332-894
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               332-898
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               348
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               54, 38
               

               Conread position:
               332-899
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               343
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               125, 109
               

               Conread position:
               333-754
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               126, 104
               

               Conread position:
               334-871
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               333
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               293, 259
               

               Conread position:
               336-898
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               342
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               276, 271
               

               Conread position:
               337-872
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               329
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               129, 113
               

               Conread position:
               338-870
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 104
               

               Conread position:
               338-898
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               49, 43
               

               Conread position:
               342-873
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               326
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               203, 191
               

               Conread position:
               344-775
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               273
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               191, 177
               

               Conread position:
               344-872
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 201
               

               Conread position:
               344-873
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               347-701
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               112, 90
               

               Conread position:
               347-899
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               338
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               131, 126
               

               Conread position:
               349-870
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               306
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               211, 218
               

               Conread position:
               366-860
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               373-873
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               91, 77
               

               Conread position:
               385-696
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               166, 137
               

               Conread position:
               385-873
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               242, 217
               

               Conread position:
               385-875
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 65
               

               Conread position:
               386-864
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               416, 404
               

               Conread position:
               386-872
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               317
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               386-872
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               386-873
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               293
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               228, 221
               

               Conread position:
               387-866
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               431-872
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 94
               

               Conread position:
               459-906
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               182, 187
               

               Conread position:
               463-704
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               164, 131
               

               Conread position:
               478-784
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 77
               

               Conread position:
               640-873
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 10
               
Show alignments to all cow chromosomes.