Cow genome map

Conread name: Ss1.1-Mixn-0006b24.5

Conread position: 275-753
Cow position: chr23:25698611-25698141 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 294
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 296, 22

Conread position: 276-613
Cow position: chr23:24653981-24654324 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 167

Conread position: 316-737
Cow position: chr23:24560559-24560139 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 8

Conread position: 320-864
Cow position: chr23:24522816-24522278 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 334
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 138, 12

Conread position: 326-899
Cow position: chr23:25626118-25626688 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 352
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 132, 121

Conread position: 330-874
Cow position: chr23:25626206-25626747 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 342
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 33

Conread position: 331-580
Cow position: chr23:24560377-24560128 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 110

Conread position: 331-615
Cow position: chr23:24626401-24626685 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 106

Conread position: 331-616
Cow position: chr23:25724034-25723749 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 56

Conread position: 331-747
Cow position: chr23:24535868-24535452 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 271
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 88, 77

Conread position: 331-749
Cow position: chr23:25660328-25660746 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 272
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 43

Conread position: 331-864
Cow position: chr23:24560797-24560265 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 40

Conread position: 331-872
Cow position: chr23:25626543-25627082 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 346
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 130, 43

Conread position: 331-894
Cow position: chr23:24547237-24546674 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 354
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 110

Conread position: 331-899
Cow position: chr23:24560713-24560145 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 110

Conread position: 331-899
Cow position: chr23:24639309-24639877 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 341
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 90

Conread position: 332-702
Cow position: chr23:24522558-24522188 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 232
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 130, 118

Conread position: 332-753
Cow position: chr23:24535951-24535530 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 265
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 42

Conread position: 332-755
Cow position: chr23:25660245-25660668 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 265
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 105

Conread position: 332-876
Cow position: chr23:25626040-25626584 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 324
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 211, 187

Conread position: 333-766
Cow position: chr23:24626319-24626750 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 275
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 295, 283

Conread position: 336-836
Cow position: chr23:24639566-24640066 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 320
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 124, 105

Conread position: 336-870
Cow position: chr23:25660165-25660699 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 34

Conread position: 336-873
Cow position: chr23:24536031-24535494 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 334
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 274, 266

Conread position: 336-873
Cow position: chr23:24639230-24639767 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 322
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 106

Conread position: 338-705
Cow position: chr23:25724111-25723744 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 229
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 303, 309

Conread position: 344-864
Cow position: chr23:24639490-24640009 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 321
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 187, 178

Conread position: 344-873
Cow position: chr23:24639154-24639683 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 306
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 104

Conread position: 385-703
Cow position: chr23:25698677-25698359 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 67

Conread position: 385-704
Cow position: chr23:25698425-25698106 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 212
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 65

Conread position: 385-775
Cow position: chr23:24547267-24546877 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 254
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 67

Conread position: 385-873
Cow position: chr23:25626429-25626914 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 310
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 101, 106

Conread position: 391-870
Cow position: chr23:24560821-24560342 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 302
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 64

Conread position: 400-777
Cow position: chr23:24626302-24626678 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 243
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 40

Conread position: 410-754
Cow position: chr23:24522564-24522220 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 212
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 207, 218

Conread position: 458-873
Cow position: chr23:24626276-24626691 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 63

Conread position: 459-869
Cow position: chr23:25625999-25626409 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 247
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 62

Conread position: 461-865
Cow position: chr23:24547275-24546871 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 261
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 167, 146

Conread position: 477-753
Cow position: chr23:25724056-25723780 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 485-872
Cow position: chr23:25660146-25660533 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 242
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 51

Conread position: 485-873
Cow position: chr23:24536050-24535662 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 241
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 119

Conread position: 486-864
Cow position: chr23:25724131-25723753 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 230
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 130, 144

Conread position: 486-873
Cow position: chr23:24547334-24546947 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 244
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 126, 118

Conread position: 486-873
Cow position: chr23:24560892-24560507 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 247
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 157, 23

Conread position: 583-857
Cow position: chr23:24654042-24654316 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 218, 193

Show alignments to all cow chromosomes.