Cow genome map


           Conread name:
           Ss1.1-Mixn-0006b24.5
        

               Conread position:
               275-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               294
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               296, 22
               

               Conread position:
               276-613
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 167
               

               Conread position:
               316-737
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 8
               

               Conread position:
               320-864
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               138, 12
               

               Conread position:
               326-899
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               352
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               132, 121
               

               Conread position:
               330-874
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               342
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               331-580
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               140, 110
               

               Conread position:
               331-615
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               129, 106
               

               Conread position:
               331-616
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 56
               

               Conread position:
               331-747
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               88, 77
               

               Conread position:
               331-749
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               331-864
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               331-872
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               346
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               130, 43
               

               Conread position:
               331-894
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               354
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               135, 110
               

               Conread position:
               331-899
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 110
               

               Conread position:
               331-899
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               341
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               72, 90
               

               Conread position:
               332-702
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               130, 118
               

               Conread position:
               332-753
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               332-755
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               332-876
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               324
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               211, 187
               

               Conread position:
               333-766
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               275
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               295, 283
               

               Conread position:
               336-836
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               320
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               124, 105
               

               Conread position:
               336-870
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               336-873
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               334
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               274, 266
               

               Conread position:
               336-873
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               124, 106
               

               Conread position:
               338-705
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               303, 309
               

               Conread position:
               344-864
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               321
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               187, 178
               

               Conread position:
               344-873
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 104
               

               Conread position:
               385-703
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 67
               

               Conread position:
               385-704
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               85, 65
               

               Conread position:
               385-775
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 67
               

               Conread position:
               385-873
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               310
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               101, 106
               

               Conread position:
               391-870
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               400-777
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               410-754
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               207, 218
               

               Conread position:
               458-873
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               459-869
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               461-865
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               167, 146
               

               Conread position:
               477-753
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               485-872
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               485-873
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               128, 119
               

               Conread position:
               486-864
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               130, 144
               

               Conread position:
               486-873
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               126, 118
               

               Conread position:
               486-873
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               157, 23
               

               Conread position:
               583-857
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               218, 193
               
Show alignments to all cow chromosomes.