Cow genome map


           Conread name:
           Ss1.1-Mixn-0006b24.5
        

               Conread position:
               276-693
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               352, 17
               

               Conread position:
               317-855
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               335
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               141, 132
               

               Conread position:
               318-859
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               147, 119
               

               Conread position:
               320-873
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 124
               

               Conread position:
               321-698
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               367, 11
               

               Conread position:
               324-704
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               149, 155
               

               Conread position:
               324-873
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               344
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               331-590
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 106
               

               Conread position:
               331-592
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               56, 51
               

               Conread position:
               331-615
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               127, 118
               

               Conread position:
               331-700
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 43
               

               Conread position:
               331-738
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               140, 110
               

               Conread position:
               331-738
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               212, 205
               

               Conread position:
               331-740
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               130, 108
               

               Conread position:
               331-768
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               137, 111
               

               Conread position:
               331-775
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               130, 108
               

               Conread position:
               331-784
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               129, 119
               

               Conread position:
               331-865
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 46
               

               Conread position:
               331-865
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               328
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 124
               

               Conread position:
               331-866
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               132, 124
               

               Conread position:
               331-866
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 110
               

               Conread position:
               331-869
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               336
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               213, 195
               

               Conread position:
               331-869
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               331-870
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               331-872
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               324
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               132, 119
               

               Conread position:
               331-899
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               350
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               311, 318
               

               Conread position:
               332-829
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               304
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               82, 70
               

               Conread position:
               332-858
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               128, 118
               

               Conread position:
               332-864
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               204, 213
               

               Conread position:
               332-865
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               128, 110
               

               Conread position:
               335-865
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               319
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               195, 119
               

               Conread position:
               336-858
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               316
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               135, 101
               

               Conread position:
               338-702
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               125, 112
               

               Conread position:
               344-692
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               114, 105
               

               Conread position:
               344-836
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               297, 301
               

               Conread position:
               344-865
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               314
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               114, 97
               

               Conread position:
               344-873
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               329
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               211, 194
               

               Conread position:
               347-700
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               347-781
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               160, 156
               

               Conread position:
               384-789
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 66
               

               Conread position:
               385-873
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               162, 136
               

               Conread position:
               386-873
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               85, 64
               

               Conread position:
               390-704
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               390-836
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               70, 13
               

               Conread position:
               391-873
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               299
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               400-696
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               408-781
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               409-873
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 143
               

               Conread position:
               410-705
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 123
               

               Conread position:
               410-865
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               272
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               218, 210
               

               Conread position:
               430-872
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               482-862
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               97, 89
               
Show alignments to all cow chromosomes.