Cow genome map
| Conread name: | Ss1.1-Mixn-0006b24.5 |
| Conread position: | 33-176 |
| Cow position: | chr28:34671797-34671940 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-1104 |
| Cow position: | chr28:34673195-34674139 (view UCSC Genome Browser custom track) |
| Alignm length: | 946 |
| Alignm identity: | 889 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 822 |
| Conread position: | 324-671 |
| Cow position: | chr28:7758409-7758756 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 317, 321 |
| Conread position: | 324-698 |
| Cow position: | chr28:7758493-7758867 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 306, 283 |
| Conread position: | 330-866 |
| Cow position: | chr28:9290008-9290541 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 331-596 |
| Cow position: | chr28:9290427-9290691 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 331-676 |
| Cow position: | chr28:7810599-7810944 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 111 |
| Conread position: | 331-704 |
| Cow position: | chr28:34696172-34696545 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 331-706 |
| Cow position: | chr28:7757928-7758303 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 331-748 |
| Cow position: | chr28:9253195-9253612 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 127, 107 |
| Conread position: | 331-755 |
| Cow position: | chr28:9290260-9290682 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 310, 115 |
| Conread position: | 331-859 |
| Cow position: | chr28:7810356-7810875 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 331-864 |
| Cow position: | chr28:7757508-7758041 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 143 |
| Conread position: | 331-865 |
| Cow position: | chr28:7757424-7757958 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 335 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 224, 191 |
| Conread position: | 331-872 |
| Cow position: | chr28:7757760-7758301 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 341 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 129, 111 |
| Conread position: | 331-873 |
| Cow position: | chr28:9253027-9253569 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 272 |
| Conread position: | 332-703 |
| Cow position: | chr28:9290345-9290714 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 129, 44 |
| Conread position: | 332-861 |
| Cow position: | chr28:11334212-11333683 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 319 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 332-872 |
| Cow position: | chr28:9252944-9253484 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 332-873 |
| Cow position: | chr28:34696005-34696546 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 333-754 |
| Cow position: | chr28:7758334-7758755 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 127, 104 |
| Conread position: | 335-750 |
| Cow position: | chr28:9298579-9298992 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 344-675 |
| Cow position: | chr28:11333864-11333533 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 103, 92 |
| Conread position: | 344-871 |
| Cow position: | chr28:7810285-7810803 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 334 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 344-872 |
| Cow position: | chr28:7757353-7757881 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 319 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 369-882 |
| Cow position: | chr28:9290133-9290641 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 376-755 |
| Cow position: | chr28:7810560-7810939 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 385-899 |
| Cow position: | chr28:9252912-9253427 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 390-780 |
| Cow position: | chr28:11333902-11333512 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 396-873 |
| Cow position: | chr28:34695985-34696462 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-898 |
| Cow position: | chr28:34695724-34696151 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 491-873 |
| Cow position: | chr28:33210228-33210611 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 74 |
Show alignments to all cow chromosomes.