Cow genome map
| Conread name: | Ss1.1-Mixn-0006b24.5 |
| Conread position: | 318-873 |
| Cow position: | chr8:46815870-46816427 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 341 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 60, 6 |
| Conread position: | 321-870 |
| Cow position: | chr8:48407464-48406915 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 204 |
| Conread position: | 321-899 |
| Cow position: | chr8:48407128-48406550 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 357 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 331-691 |
| Cow position: | chr8:45201614-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 131, 104 |
| Conread position: | 331-697 |
| Cow position: | chr8:46816893-46817259 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 331-753 |
| Cow position: | chr8:45201446-45201868 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 139, 119 |
| Conread position: | 331-859 |
| Cow position: | chr8:45200942-45201470 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 327 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 129, 106 |
| Conread position: | 331-872 |
| Cow position: | chr8:45201110-45201651 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 190 |
| Conread position: | 331-873 |
| Cow position: | chr8:55581082-55581624 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 331-899 |
| Cow position: | chr8:46816473-46817041 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 347 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 331-899 |
| Cow position: | chr8:48407370-48406802 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 348 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 135, 110 |
| Conread position: | 332-858 |
| Cow position: | chr8:48406949-48406423 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 322 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 332-870 |
| Cow position: | chr8:45201363-45201901 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 335 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 128, 104 |
| Conread position: | 332-872 |
| Cow position: | chr8:46816222-46816762 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 338 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 332-872 |
| Cow position: | chr8:46816558-46817098 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 333-858 |
| Cow position: | chr8:48407620-48407095 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 333-867 |
| Cow position: | chr8:46815971-46816505 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 129, 109 |
| Conread position: | 334-881 |
| Cow position: | chr8:45201197-45201743 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 333 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 137, 108 |
| Conread position: | 336-873 |
| Cow position: | chr8:55581003-55581540 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 324 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 305, 313 |
| Conread position: | 344-864 |
| Cow position: | chr8:46816822-46817342 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 316 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 116, 93 |
| Conread position: | 344-865 |
| Cow position: | chr8:46816150-46816671 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 317 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 344-869 |
| Cow position: | chr8:46816402-46816927 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 332 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 344-870 |
| Cow position: | chr8:48407021-48406495 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 281, 271 |
| Conread position: | 345-857 |
| Cow position: | chr8:55580844-55581356 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 345-872 |
| Cow position: | chr8:55580760-55581287 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 346-698 |
| Cow position: | chr8:48406599-48406238 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 295, 301 |
| Conread position: | 347-741 |
| Cow position: | chr8:45201546-45201940 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 200, 191 |
| Conread position: | 347-755 |
| Cow position: | chr8:55581182-55581590 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 285, 298 |
| Conread position: | 384-754 |
| Cow position: | chr8:48406729-48406359 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 257, 261 |
| Conread position: | 385-866 |
| Cow position: | chr8:48407148-48406667 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 385-873 |
| Cow position: | chr8:48407484-48406996 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 222 |
| Conread position: | 386-698 |
| Cow position: | chr8:55581389-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 432-894 |
| Cow position: | chr8:46815899-46816364 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 188 |
| Conread position: | 438-873 |
| Cow position: | chr8:55580768-55581204 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 66 |
Show alignments to all cow chromosomes.